Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KLFDGBMA_10 | 41293 | 44619 | Bifidobacterium bifidum ileS conferring resistance to mupirocin | ARO:3003730 | Bbif_ileS_MUP | 99.64 | 100.09 | CP001840.1 |
| KLFDGBMA_33 | 20505 | 24122 | Bifidobacterium adolescentis rpoB mutants conferring resistance to rifampicin | ARO:3004480 | Bado_rpoB_RIF | 91.32 | 101.69 | NC_008618.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| KLFDGBMA_69 | 1962 | 2641 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KLFDGBMA_1 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_2 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_3 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_4 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_5 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_6 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_7 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_8 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_9 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_10 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_11 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_12 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_13 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_14 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_15 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_16 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_17 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_18 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_19 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_20 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_21 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_22 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_23 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_24 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_25 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_26 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_27 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_28 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_29 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_30 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_31 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_32 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_33 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_34 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_35 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_36 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_37 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_38 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_39 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_40 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_41 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_42 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_43 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_44 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_45 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_46 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_47 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_48 | 1.0 | 0.0 | 1.0 |
| KLFDGBMA_49 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_50 | 1.0 | 0.0 | 1.0 |
| KLFDGBMA_51 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_52 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_53 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_54 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_55 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_56 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_57 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_58 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_59 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_60 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_61 | 1.0 | 0.0 | 1.0 |
| KLFDGBMA_62 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_63 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_64 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_65 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_66 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_67 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_68 | 1.0 | 0.0 | 1.0 |
| KLFDGBMA_69 | 1.0 | 0.0 | 1.0 |
| KLFDGBMA_70 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_71 | 1.0 | 0.0 | 1.0 |
| KLFDGBMA_72 | 1.0 | 0.0 | 1.0 |
| KLFDGBMA_73 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_74 | 1.0 | 0.0 | 1.0 |
| KLFDGBMA_75 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_76 | 1.0 | 0.0 | 1.0 |
| KLFDGBMA_77 | 0.0 | 1.0 | 0.0 |
| KLFDGBMA_78 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KLFDGBMA_12 | 19107 | 32288 | False | Myoviridae / Podoviridae | VOG4548, VOG5689, VOG0382, VOG0052, VOG8190 |
Phigaro v2.4.0 (Database: Jan. 2024 release)