Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EJJKLMNM_122 | 423 | 1 | EF-P | 3.63e-103 | elongation factor | 96.45 | 75.00 | AAL23157 |
| EJJKLMNM_83 | 35691 | 35888 | CspA | 7.71e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| EJJKLMNM_83 | 35691 | 35885 | CspR | 3.35e-28 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EJJKLMNM_1 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_2 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_3 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_4 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_5 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_6 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_7 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_8 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_9 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_10 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_11 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_12 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_13 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_15 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_16 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_17 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_18 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_19 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_20 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_21 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_22 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_24 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_25 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_26 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_27 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_28 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_30 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_33 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_44 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_55 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_64 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_74 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_83 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_94 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_105 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_106 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_117 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_127 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_138 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_148 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_157 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_168 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_179 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_190 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_201 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_212 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_213 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_224 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_235 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_246 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_257 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_268 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_279 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_290 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_301 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_312 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_317 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_318 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_319 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_320 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_321 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_322 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_323 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_324 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_325 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_326 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_327 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_328 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_329 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_330 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_331 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_332 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_333 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_334 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_335 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_336 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_337 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_338 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_339 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_340 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_341 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_342 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_343 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_344 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_345 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_346 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_347 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_348 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_349 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_350 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_351 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_352 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_353 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_354 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_355 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_356 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_357 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_358 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_359 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_360 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_361 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_362 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_363 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_364 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_365 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_366 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_367 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_368 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_369 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_370 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_371 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_372 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_373 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_374 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_375 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_376 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_377 | 0.0 | 1.0 | 0.0 |
| EJJKLMNM_378 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_379 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_380 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_381 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_382 | 1.0 | 0.0 | 1.0 |
| EJJKLMNM_383 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EJJKLMNM_383 | 2404 | 32541 | False | Siphoviridae | VOG0189, VOG8685, VOG4693, VOG4559, VOG0198, VOG4841, VOG4581, VOG4544, VOG4556, VOG4553, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG9471, VOG6163, VOG0801, VOG3462, VOG10972, VOG9997, VOG4856, VOG10223, VOG8917 |
Phigaro v2.4.0 (Database: Jan. 2024 release)