Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JELIGLPP_1 | 0.0 | 1.0 | 0.0 |
| JELIGLPP_2 | 1.0 | 0.0 | 1.0 |
| JELIGLPP_3 | 0.0 | 1.0 | 0.0 |
| JELIGLPP_4 | 0.0 | 1.0 | 0.0 |
| JELIGLPP_5 | 0.0 | 1.0 | 0.0 |
| JELIGLPP_6 | 0.0 | 1.0 | 0.0 |
| JELIGLPP_7 | 1.0 | 0.0 | 1.0 |
| JELIGLPP_8 | 0.0 | 1.0 | 0.0 |
| JELIGLPP_9 | 0.0 | 1.0 | 0.0 |
| JELIGLPP_10 | 0.0 | 1.0 | 0.0 |
| JELIGLPP_11 | 0.0 | 1.0 | 0.0 |
| JELIGLPP_12 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JELIGLPP_5 | 279165 | 280030 | False | Unknown | VOG8288 |
| JELIGLPP_6 | 18956 | 54709 | False | Siphoviridae | VOG4705, VOG4904, VOG6540, VOG4856, VOG4645, VOG4659, VOG4633, VOG4760, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG1329, VOG4555, VOG0686, VOG0692, VOG0691, VOG4544, VOG5532, VOG4618, VOG1422, VOG9702, VOG0198, VOG0189, VOG4566, VOG0283, VOG2703, VOG4552, VOG5353, VOG9667 |
| JELIGLPP_8 | 15793 | 39934 | False | Siphoviridae | VOG0198, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG8263, VOG4633, VOG4659, VOG8355, VOG1594 |
| JELIGLPP_12 | 238323 | 268040 | False | Siphoviridae | VOG0703, VOG5087, VOG0861, VOG4705, VOG10484, VOG6540, VOG0083, VOG7017, VOG4659, VOG4633, VOG4545, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG5051, VOG1886, VOG4581, VOG1648, VOG4841, VOG0198, VOG6005, VOG1698, VOG5562, VOG5998 |
| JELIGLPP_12 | 319582 | 351222 | False | Myoviridae | VOG0861, VOG4705, VOG9945, VOG5334, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545, VOG0376 |
Phigaro v2.4.0 (Database: Jan. 2024 release)