Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FEENPMNN_1 | 0.0 | 1.0 | 0.0 |
| FEENPMNN_2 | 0.0 | 1.0 | 0.0 |
| FEENPMNN_3 | 0.0 | 1.0 | 0.0 |
| FEENPMNN_4 | 1.0 | 0.0 | 1.0 |
| FEENPMNN_5 | 1.0 | 0.0 | 1.0 |
| FEENPMNN_6 | 1.0 | 0.0 | 1.0 |
| FEENPMNN_7 | 1.0 | 0.0 | 1.0 |
| FEENPMNN_8 | 1.0 | 0.0 | 1.0 |
| FEENPMNN_9 | 0.0 | 1.0 | 0.0 |
| FEENPMNN_10 | 0.0 | 1.0 | 0.0 |
| FEENPMNN_11 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FEENPMNN_5 | 517 | 27209 | False | Myoviridae | VOG1912, VOG5027, VOG4865, VOG1915, VOG2779, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG4760, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG8168, VOG5763, VOG5913 |
| FEENPMNN_9 | 3575 | 14518 | False | Myoviridae | VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG6932, VOG1915, VOG4865, VOG5027, VOG1912, VOG7407, VOG0796 |
| FEENPMNN_9 | 91260 | 119135 | False | Siphoviridae | VOG0861, VOG4705, VOG4904, VOG6540, VOG4687, VOG0083, VOG7017, VOG4659, VOG4633, VOG3179, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG5051, VOG1886, VOG4581, VOG1648, VOG4841, VOG0198, VOG6005, VOG1698 |
| FEENPMNN_10 | 445 | 9771 | False | Myoviridae | VOG1353, VOG4778, VOG1942, VOG2779, VOG1915, VOG4865, VOG5027, VOG1912, VOG7407, VOG3699 |
| FEENPMNN_10 | 231950 | 234218 | False | Myoviridae / Siphoviridae | VOG4799, VOG8288, VOG5458, VOG8288, VOG4566 |
Phigaro v2.4.0 (Database: Jan. 2024 release)