Probiotic potential risk score


ARGs VFs PGs PPRS
0000.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
HNACDEBD_10.01.00.0
HNACDEBD_21.00.01.0
HNACDEBD_30.01.00.0
HNACDEBD_40.01.00.0
HNACDEBD_51.00.01.0
HNACDEBD_61.00.01.0
HNACDEBD_70.01.00.0
HNACDEBD_81.00.01.0
HNACDEBD_90.01.00.0
HNACDEBD_100.01.00.0
HNACDEBD_110.01.00.0
HNACDEBD_121.00.01.0
HNACDEBD_130.01.00.0
HNACDEBD_141.00.01.0
HNACDEBD_150.01.00.0
HNACDEBD_161.00.01.0
HNACDEBD_170.01.00.0
HNACDEBD_181.00.01.0
HNACDEBD_191.00.01.0
HNACDEBD_200.01.00.0
HNACDEBD_211.00.01.0
HNACDEBD_220.01.00.0
HNACDEBD_231.00.01.0
HNACDEBD_240.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
HNACDEBD_1470712505FalseSiphoviridaeVOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198
HNACDEBD_1375300402569FalseMyoviridaeVOG4620, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6307, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG6932, VOG1915, VOG4865, VOG5027, VOG1912, VOG7407, VOG0796, VOG0686
HNACDEBD_1437752441719FalseSiphoviridaeVOG4799, VOG8288, VOG5458, VOG8288, VOG4799, VOG4603, VOG6495, VOG4602
HNACDEBD_116812051707295FalseSiphoviridaeVOG4618, VOG5532, VOG4544, VOG0691, VOG0692, VOG0686, VOG4555, VOG1329, VOG0695, VOG0696, VOG0697, VOG0698, VOG9763, VOG0701, VOG4760, VOG4633, VOG4659, VOG4645, VOG4856
HNACDEBD_35082577038FalseMyoviridaeVOG8269, VOG0638, VOG4618, VOG7407, VOG1912, VOG4564, VOG1915, VOG1942, VOG4710, VOG1353, VOG1883, VOG1352, VOG4699, VOG8263, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4620, VOG5334
HNACDEBD_3111809127548FalseSiphoviridaeVOG2090, VOG2352, VOG4010, VOG0275, VOG0371, VOG4602, VOG8520, VOG8520, VOG4552, VOG2228, VOG9708, VOG4611, VOG0322, VOG4548, VOG6545
HNACDEBD_3129305139720FalseSiphoviridaeVOG5278, VOG3307, VOG0327, VOG6005, VOG0198, VOG4841, VOG4581, VOG2545, VOG0376, VOG1886, VOG0202, VOG4556, VOG4573
HNACDEBD_13200849228930FalseMyoviridaeVOG0376, VOG2545, VOG0796, VOG7407, VOG1912, VOG5027, VOG4918, VOG1915, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG6163, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG5334

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements