Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MCEBOPOA_75 | 96060 | 95356 | WalR | 1.62e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| MCEBOPOA_35 | 10134 | 10331 | CspR | 8.70e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MCEBOPOA_43 | 7703 | 8764 | repUS74 | 1064 / 1062 | 92.20 | CP000424 |
| MCEBOPOA_68 | 4318 | 5253 | rep28 | 937 / 936 | 81.96 | CP005948 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MCEBOPOA_11 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_22 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_33 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_35 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_36 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_37 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_38 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_39 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_40 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_41 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_42 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_43 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_44 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_45 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_46 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_47 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_48 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_49 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_50 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_51 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_52 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_53 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_54 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_55 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_56 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_57 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_58 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_59 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_60 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_61 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_62 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_63 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_64 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_65 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_66 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_67 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_68 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_69 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_70 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_71 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_72 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_73 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_74 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_75 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_76 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_77 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_78 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_79 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_80 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_81 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_82 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_83 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_84 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_85 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_86 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_87 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_90 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_91 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_92 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_93 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_94 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_95 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_96 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_97 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_98 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_99 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_101 | 1.0 | 0.0 | 1.0 |
| MCEBOPOA_108 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_119 | 0.0 | 1.0 | 0.0 |
| MCEBOPOA_130 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MCEBOPOA_35 | 32533 | 60473 | False | Siphoviridae | VOG1309, VOG0186, VOG4855, VOG0226, VOG11003, VOG9860, VOG0536, VOG4567, VOG0198, VOG9153, VOG4570, VOG3699, VOG4544, VOG10227, VOG0691, VOG0692, VOG5616, VOG1183, VOG4555, VOG4711, VOG0695, VOG0696, VOG0697, VOG0698, VOG10044, VOG0701, VOG4545, VOG4605 |
| MCEBOPOA_130 | 57167 | 65403 | False | Siphoviridae | VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205 |
Phigaro v2.4.0 (Database: Jan. 2024 release)