Probiotic potential risk score


ARGs VFs PGs PPRS
0022.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
BCHACCBI_104104249720WalR9.94e-113transcriptional regulatory protein83.40100.00EPH95667
BCHACCBI_211013410331CspR9.50e-34cold shock protein89.39100.00AAO82613

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
BCHACCBI_3011013repUS741015 / 106291.82CP000424
BCHACCBI_5443185253rep28937 / 93681.96CP005948

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
BCHACCBI_110.01.00.0
BCHACCBI_180.01.00.0
BCHACCBI_190.01.00.0
BCHACCBI_200.01.00.0
BCHACCBI_210.01.00.0
BCHACCBI_220.01.00.0
BCHACCBI_230.01.00.0
BCHACCBI_240.01.00.0
BCHACCBI_250.01.00.0
BCHACCBI_260.01.00.0
BCHACCBI_270.01.00.0
BCHACCBI_281.00.01.0
BCHACCBI_290.01.00.0
BCHACCBI_301.00.01.0
BCHACCBI_310.01.00.0
BCHACCBI_320.01.00.0
BCHACCBI_330.01.00.0
BCHACCBI_340.01.00.0
BCHACCBI_350.01.00.0
BCHACCBI_361.00.01.0
BCHACCBI_370.01.00.0
BCHACCBI_380.01.00.0
BCHACCBI_391.00.01.0
BCHACCBI_401.00.01.0
BCHACCBI_410.01.00.0
BCHACCBI_420.01.00.0
BCHACCBI_430.01.00.0
BCHACCBI_440.01.00.0
BCHACCBI_450.01.00.0
BCHACCBI_460.01.00.0
BCHACCBI_471.00.01.0
BCHACCBI_480.01.00.0
BCHACCBI_490.01.00.0
BCHACCBI_500.01.00.0
BCHACCBI_511.00.01.0
BCHACCBI_520.01.00.0
BCHACCBI_531.00.01.0
BCHACCBI_541.00.01.0
BCHACCBI_550.01.00.0
BCHACCBI_561.00.01.0
BCHACCBI_571.00.01.0
BCHACCBI_580.01.00.0
BCHACCBI_590.01.00.0
BCHACCBI_600.01.00.0
BCHACCBI_611.00.01.0
BCHACCBI_620.01.00.0
BCHACCBI_631.00.01.0
BCHACCBI_641.00.01.0
BCHACCBI_651.00.01.0
BCHACCBI_681.00.01.0
BCHACCBI_690.01.00.0
BCHACCBI_700.01.00.0
BCHACCBI_710.01.00.0
BCHACCBI_721.00.01.0
BCHACCBI_731.00.01.0
BCHACCBI_751.00.01.0
BCHACCBI_761.00.01.0
BCHACCBI_771.00.01.0
BCHACCBI_820.01.00.0
BCHACCBI_930.01.00.0
BCHACCBI_1040.01.00.0
BCHACCBI_1150.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
BCHACCBI_213253364371FalseSiphoviridaeVOG1309, VOG0186, VOG4855, VOG0226, VOG11003, VOG9860, VOG0536, VOG4567, VOG0198, VOG9153, VOG4570, VOG3699, VOG4544, VOG10227, VOG0691, VOG0692, VOG5616, VOG1183, VOG4555, VOG4711, VOG0695, VOG0696, VOG0697, VOG0698, VOG10044, VOG0701, VOG4545, VOG4605, VOG4605, VOG4599, VOG6455, VOG7896, VOG0861, VOG7017
BCHACCBI_1157065178887FalseSiphoviridaeVOG4609, VOG0205, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements