Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GKNECEFK_1 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_2 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_3 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_4 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_5 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_6 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_7 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_8 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_9 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_10 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_11 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_12 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_13 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_14 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_15 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_16 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_17 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_18 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_19 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_20 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_21 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_22 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_23 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_24 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_25 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_26 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_27 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_28 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_29 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_30 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_31 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_32 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_33 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_34 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_35 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_36 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_38 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_39 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_40 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_41 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_42 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_43 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_44 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_45 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_46 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_47 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_48 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_49 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_50 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_51 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_52 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_53 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_54 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_55 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_56 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_57 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_58 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_59 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_60 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_62 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_63 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_64 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_65 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_66 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_67 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_68 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_69 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_70 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_71 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_72 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_73 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_74 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_75 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_76 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_77 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_78 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_79 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_80 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_81 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_82 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_83 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_84 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_85 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_86 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_87 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_88 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_89 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_90 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_91 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_92 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_93 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_94 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_95 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_96 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_97 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_98 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_99 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_101 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_112 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_113 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_124 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_135 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_146 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_153 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_154 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_155 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_156 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_157 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_158 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_159 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_160 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_161 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_162 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_163 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_164 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_165 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_166 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_167 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_168 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_169 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_170 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_171 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_172 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_173 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_174 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_175 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_176 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_177 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_178 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_179 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_180 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_181 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_182 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_183 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_184 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_185 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_186 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_187 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_188 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_189 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_190 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_191 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_192 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_193 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_194 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_195 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_196 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_197 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_198 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_199 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_200 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_201 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_202 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_203 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_204 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_205 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_206 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_207 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_208 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_209 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_210 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_211 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_212 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_213 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_214 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_215 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_216 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_217 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_218 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_219 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_220 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_221 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_222 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_223 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_224 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_225 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_226 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_227 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_228 | 1.0 | 0.0 | 1.0 |
| GKNECEFK_229 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_230 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_231 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_232 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_233 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_234 | 0.0 | 1.0 | 0.0 |
| GKNECEFK_235 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GKNECEFK_159 | 4589 | 6340 | False | Siphoviridae | VOG4552, VOG8609, VOG1250 |
| GKNECEFK_159 | 7691 | 44170 | False | Myoviridae | VOG0906, VOG4566, VOG0189, VOG4732, VOG4693, VOG0198, VOG4455, VOG0376, VOG2545, VOG0796, VOG7407, VOG1912, VOG5027, VOG4918, VOG1915, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG6163, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG5913, VOG9945 |
Phigaro v2.4.0 (Database: Jan. 2024 release)