Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FJGJANMO_41 | 68307 | 69011 | WalR | 1.78e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| FJGJANMO_42 | 55474 | 55668 | CspR | 1.24e-29 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| FJGJANMO_42 | 55474 | 55671 | CspA | 1.90e-29 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FJGJANMO_1 | 1.0 | 0.0 | 1.0 |
| FJGJANMO_2 | 1.0 | 0.0 | 1.0 |
| FJGJANMO_3 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_4 | 1.0 | 0.0 | 1.0 |
| FJGJANMO_5 | 1.0 | 0.0 | 1.0 |
| FJGJANMO_6 | 1.0 | 0.0 | 1.0 |
| FJGJANMO_7 | 1.0 | 0.0 | 1.0 |
| FJGJANMO_8 | 1.0 | 0.0 | 1.0 |
| FJGJANMO_9 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_27 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_28 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_29 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_30 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_31 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_32 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_33 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_34 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_35 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_36 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_37 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_38 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_39 | 1.0 | 0.0 | 1.0 |
| FJGJANMO_41 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_42 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_43 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_44 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_45 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_46 | 0.0 | 1.0 | 0.0 |
| FJGJANMO_47 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FJGJANMO_32 | 2240 | 56719 | False | Siphoviridae | VOG10608, VOG1335, VOG4545, VOG1334, VOG1333, VOG4634, VOG0704, VOG1330, VOG4713, VOG1887, VOG3434, VOG10914, VOG4564, VOG7038, VOG0720, VOG4544, VOG0796, VOG4694, VOG0198, VOG3643, VOG0044, VOG4705, VOG4334, VOG6373, VOG8438, VOG4619, VOG0801, VOG6163, VOG0701, VOG9763, VOG6548, VOG0697, VOG0696, VOG0695, VOG4711, VOG9317, VOG0692, VOG0691, VOG3699, VOG0638, VOG1183, VOG0198, VOG7719 |
| FJGJANMO_38 | 6445 | 43804 | False | Siphoviridae | VOG8222, VOG0181, VOG8925, VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG0327, VOG0586, VOG3643, VOG4673, VOG8478, VOG4844, VOG4556, VOG4573, VOG4553, VOG0562, VOG4589, VOG0539, VOG0704, VOG4586, VOG0541, VOG6163, VOG0801, VOG4619, VOG3498, VOG9997, VOG8917, VOG0602, VOG8294, VOG1521, VOG1191, VOG3443 |
Phigaro v2.4.0 (Database: Jan. 2024 release)