Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EFBHDGAE_14 | 482 | 285 | CspA | 6.24e-33 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| EFBHDGAE_14 | 482 | 285 | CspR | 6.38e-33 | cold shock protein | 81.82 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EFBHDGAE_1 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_2 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_3 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_13 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_19 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_20 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_21 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_22 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_23 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_24 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_25 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_26 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_27 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_28 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_29 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_30 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_31 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_32 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_33 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_34 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_35 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_36 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_37 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_38 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_39 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_40 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_41 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_42 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_43 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_44 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_45 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_46 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_47 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_48 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_49 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_50 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_51 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_52 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_53 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_54 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_55 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_56 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_57 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_58 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_59 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_60 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_61 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_62 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_63 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_64 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_65 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_66 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_67 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_68 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_69 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_70 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_71 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_72 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_73 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_74 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_75 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_76 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_77 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_78 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_79 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_80 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_81 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_82 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_83 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_84 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_85 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_86 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_87 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_88 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_89 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_90 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_91 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_92 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_93 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_94 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_95 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_96 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_97 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_98 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_99 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_100 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_101 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_102 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_103 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_104 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_105 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_106 | 0.0 | 1.0 | 0.0 |
| EFBHDGAE_108 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_109 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_110 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_111 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_112 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_113 | 1.0 | 0.0 | 1.0 |
| EFBHDGAE_114 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EFBHDGAE_2 | 8236 | 41240 | False | Siphoviridae | VOG6422, VOG7298, VOG9667, VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG4010, VOG4559, VOG0198, VOG0796, VOG10227, VOG0720, VOG4564, VOG10914, VOG1319, VOG4713, VOG5660, VOG0724, VOG0799, VOG0725, VOG4545, VOG0727, VOG4599, VOG0648, VOG8917, VOG1637, VOG0703, VOG9955 |
Phigaro v2.4.0 (Database: Jan. 2024 release)