Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DBHBJCJL_1 | 1700583 | 1701284 | WalR | 4.23e-107 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DBHBJCJL_1 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DBHBJCJL_1 | 8288 | 34940 | False | Myoviridae | VOG0796, VOG0275, VOG4544, VOG0720, VOG4564, VOG4555, VOG3434, VOG3434, VOG1887, VOG4710, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG4910, VOG1956, VOG1433, VOG1348, VOG0573, VOG4691, VOG4845, VOG4894, VOG10914, VOG3298 |
| DBHBJCJL_1 | 411637 | 435824 | False | Myoviridae | VOG3298, VOG3298, VOG0565, VOG0870, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG4918, VOG4545, VOG4699, VOG1352, VOG1883, VOG1353, VOG1329, VOG4564 |
| DBHBJCJL_1 | 442575 | 445122 | False | Unknown | VOG6005, VOG4693, VOG4552 |
| DBHBJCJL_1 | 663653 | 695367 | False | Myoviridae | VOG4862, VOG4691, VOG3894, VOG4885, VOG4865, VOG3636, VOG3892, VOG3891, VOG3890, VOG5612, VOG4870, VOG1900, VOG3888, VOG4623, VOG3480, VOG4572, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796, VOG8503, VOG8360, VOG7406, VOG2961, VOG0044, VOG0327, VOG4606, VOG0226, VOG4548, VOG0322, VOG0685, VOG0650, VOG6841 |
| DBHBJCJL_1 | 2558391 | 2586202 | False | Myoviridae | VOG9828, VOG0045, VOG0052, VOG7407, VOG0720, VOG4564, VOG3434, VOG1887, VOG2621, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG6307, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG7896 |
| DBHBJCJL_1 | 2729190 | 2738481 | False | Siphoviridae | VOG0377, VOG1292, VOG4549, VOG10391, VOG0275, VOG3557, VOG8483, VOG0862, VOG8520, VOG4552 |
| DBHBJCJL_1 | 2742632 | 2745580 | False | Unknown | VOG0685, VOG0322, VOG0226 |
| DBHBJCJL_1 | 2754953 | 2767669 | False | Myoviridae | VOG0796, VOG0275, VOG4544, VOG0720, VOG4564, VOG4555, VOG3434, VOG1887, VOG4710, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699 |
Phigaro v2.4.0 (Database: Jan. 2024 release)