Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CBGMHJKG_229 | 24200 | 24937 | ErmB | ARO:3000375 | ErmB | 99.59 | 98.79 | AF242872.1 |
| CBGMHJKG_211 | 4133 | 6052 | tet(O/W/32/O) | ARO:3007122 | tet(O/W/32/O) | 100.00 | 100.00 | DQ525023.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CBGMHJKG_211 | 4133 | 6052 | tet(O/W/32/O/W/O) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | DQ525023 |
| CBGMHJKG_229 | 24200 | 24937 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.86 | 100.00 | X72021 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CBGMHJKG_211 | 4133 | 6049 | tet(O/W/32/O) | tetracycline resistance ribosomal protection mosaic protein Tet(O/W/32/O) | EXACTX | 100.00 | 100.00 | WP_063856419.1 |
| CBGMHJKG_229 | 24200 | 24934 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | BLASTX | 99.59 | 100.00 | WP_001038795.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CBGMHJKG_1 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_2 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_3 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_4 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_5 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_6 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_7 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_8 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_10 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_11 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_12 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_13 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_14 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_15 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_16 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_17 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_18 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_19 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_20 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_21 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_22 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_23 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_24 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_25 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_26 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_27 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_29 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_30 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_31 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_32 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_33 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_34 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_35 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_36 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_37 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_38 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_39 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_40 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_41 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_42 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_43 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_44 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_45 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_46 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_47 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_48 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_49 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_57 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_68 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_79 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_90 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_101 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_112 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_113 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_124 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_135 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_146 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_157 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_168 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_179 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_190 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_194 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_195 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_196 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_197 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_198 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_199 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_200 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_201 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_202 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_203 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_204 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_205 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_206 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_207 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_208 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_209 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_210 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_211 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_212 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_213 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_214 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_215 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_216 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_217 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_218 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_219 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_220 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_221 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_222 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_223 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_224 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_225 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_226 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_227 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_228 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_229 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_230 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_231 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_232 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_233 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_234 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_235 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_236 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_237 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_238 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_239 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_240 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_241 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_242 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_243 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_244 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_245 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_246 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_247 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_248 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_249 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_251 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_252 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_253 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_254 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_255 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_256 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_257 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_258 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_259 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_260 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_261 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_262 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_263 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_264 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_265 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_266 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_267 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_268 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_269 | 1.0 | 0.0 | 1.0 |
| CBGMHJKG_270 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_271 | 0.0 | 1.0 | 0.0 |
| CBGMHJKG_272 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)