Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FADLPDDA_1 | 202564 | 201860 | WalR | 1.52e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| FADLPDDA_39 | 13929 | 14126 | CspR | 4.14e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FADLPDDA_1 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_2 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_3 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_4 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_5 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_6 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_7 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_8 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_9 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_10 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_11 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_12 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_13 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_14 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_15 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_16 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_17 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_18 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_19 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_20 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_21 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_22 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_23 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_24 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_25 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_26 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_27 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_28 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_29 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_30 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_31 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_32 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_33 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_34 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_35 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_36 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_37 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_38 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_39 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_40 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_41 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_42 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_43 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_44 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_45 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_46 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_47 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_48 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_49 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_50 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_51 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_52 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_53 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_54 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_55 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_56 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_57 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_58 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_59 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_60 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_61 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_62 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_63 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_64 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_65 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_66 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_67 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_68 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_69 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_70 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_71 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_72 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_73 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_74 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_75 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_76 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_77 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_78 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_79 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_80 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_81 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_82 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_83 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_84 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_85 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_86 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_87 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_88 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_89 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_90 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_91 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_92 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_93 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_94 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_96 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_97 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_98 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_99 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_100 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_101 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_102 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_103 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_104 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_105 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_107 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_108 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_109 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_110 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_111 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_112 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_113 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_114 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_115 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_116 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_117 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_118 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_119 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_120 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_121 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_122 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_123 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_124 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_125 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_126 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_127 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_128 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_129 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_130 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_131 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_132 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_133 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_134 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_135 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_136 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_137 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_138 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_139 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_140 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_141 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_142 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_143 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_144 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_145 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_146 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_147 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_148 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_149 | 1.0 | 0.0 | 1.0 |
| FADLPDDA_150 | 0.0 | 1.0 | 0.0 |
| FADLPDDA_151 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FADLPDDA_8 | 65814 | 75992 | False | Siphoviridae | VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205, VOG4609 |
| FADLPDDA_35 | 5868 | 16657 | False | Siphoviridae | VOG0209, VOG4586, VOG0207, VOG0205, VOG4568, VOG4556, VOG0202, VOG1886, VOG4581, VOG0195 |
Phigaro v2.4.0 (Database: Jan. 2024 release)