Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FHCODIKC_129 | 198 | 902 | WalR | 7.82e-114 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| FHCODIKC_100 | 239 | 436 | CspR | 6.01e-34 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FHCODIKC_1 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_2 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_3 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_4 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_5 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_6 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_7 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_8 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_9 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_10 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_11 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_12 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_13 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_14 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_15 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_16 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_17 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_18 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_19 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_20 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_21 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_22 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_23 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_24 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_25 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_26 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_27 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_28 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_29 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_30 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_31 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_32 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_33 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_34 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_35 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_36 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_37 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_38 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_39 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_40 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_41 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_42 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_43 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_44 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_45 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_46 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_47 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_48 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_49 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_50 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_51 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_52 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_53 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_54 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_55 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_56 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_57 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_58 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_59 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_60 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_61 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_62 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_63 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_64 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_65 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_66 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_67 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_68 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_69 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_70 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_71 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_72 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_73 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_74 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_75 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_76 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_77 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_78 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_79 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_80 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_81 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_82 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_83 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_84 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_85 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_86 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_87 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_88 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_89 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_90 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_91 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_92 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_93 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_94 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_95 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_96 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_97 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_98 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_99 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_100 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_101 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_102 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_103 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_104 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_105 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_106 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_107 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_108 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_109 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_110 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_111 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_112 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_113 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_114 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_115 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_116 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_117 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_118 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_119 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_120 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_121 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_122 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_123 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_124 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_125 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_126 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_127 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_128 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_129 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_130 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_131 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_132 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_133 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_134 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_135 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_136 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_137 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_138 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_139 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_140 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_141 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_142 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_143 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_144 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_145 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_146 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_147 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_148 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_149 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_150 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_151 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_152 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_153 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_154 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_155 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_156 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_157 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_158 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_160 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_161 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_162 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_163 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_164 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_165 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_166 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_167 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_168 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_169 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_170 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_171 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_172 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_173 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_174 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_175 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_176 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_177 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_178 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_179 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_180 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_181 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_182 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_183 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_184 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_185 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_186 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_187 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_188 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_189 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_190 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_191 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_192 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_193 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_194 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_195 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_196 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_197 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_198 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_199 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_200 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_201 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_202 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_203 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_204 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_205 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_206 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_207 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_208 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_209 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_210 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_211 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_212 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_213 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_214 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_215 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_216 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_217 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_218 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_219 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_220 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_221 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_222 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_223 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_224 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_225 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_226 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_227 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_228 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_229 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_230 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_231 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_232 | 0.0 | 1.0 | 0.0 |
| FHCODIKC_233 | 1.0 | 0.0 | 1.0 |
| FHCODIKC_234 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FHCODIKC_6 | 42373 | 52440 | False | Siphoviridae | VOG4632, VOG4609, VOG4581, VOG4544, VOG5051, VOG4556, VOG4568, VOG0204, VOG4589 |
| FHCODIKC_44 | 2053 | 21140 | False | Siphoviridae | VOG10904, VOG4549, VOG1345, VOG4841, VOG4581, VOG1886, VOG7540, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG6163, VOG4605, VOG4599 |
Phigaro v2.4.0 (Database: Jan. 2024 release)