Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KGDJLBAH_1 | 71922 | 71725 | CspA | 2.74e-29 | cold shock protein | 86.36 | 100.00 | CAA62903 |
| KGDJLBAH_1 | 71922 | 71728 | CspR | 2.33e-27 | cold shock protein | 83.08 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KGDJLBAH_1 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_2 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_3 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_4 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_5 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_6 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_7 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_8 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_9 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_10 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_11 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_12 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_13 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_14 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_15 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_16 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_17 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_18 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_19 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_20 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_21 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_22 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_23 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_24 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_25 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_26 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_27 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_28 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_29 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_30 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_31 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_32 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_33 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_34 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_35 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_36 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_37 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_38 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_39 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_40 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_41 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_42 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_43 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_44 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_45 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_46 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_47 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_48 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_49 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_50 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_51 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_52 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_53 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_54 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_55 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_56 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_57 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_58 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_59 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_60 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_61 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_62 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_63 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_64 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_65 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_66 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_67 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_68 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_69 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_70 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_71 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_72 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_73 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_74 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_75 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_76 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_77 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_78 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_79 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_80 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_81 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_82 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_83 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_84 | 0.0 | 1.0 | 0.0 |
| KGDJLBAH_85 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_86 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_87 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_90 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_91 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_92 | 1.0 | 0.0 | 1.0 |
| KGDJLBAH_93 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KGDJLBAH_12 | 1392 | 31649 | False | Siphoviridae | VOG10972, VOG3462, VOG0801, VOG8263, VOG6698, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4581, VOG4841, VOG3349, VOG1854, VOG5453, VOG3349, VOG0198, VOG1446, VOG0198, VOG8625 |
| KGDJLBAH_12 | 35412 | 41593 | False | Myoviridae | VOG4010, VOG4122, VOG3307, VOG4693, VOG8685, VOG0189, VOG6545, VOG0322, VOG0535 |
| KGDJLBAH_30 | 5518 | 16243 | False | Myoviridae / Siphoviridae | VOG4999, VOG8353, VOG2185, VOG4025, VOG0198, VOG4573, VOG5412 |
Phigaro v2.4.0 (Database: Jan. 2024 release)