Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EJPMIEJG_4 | 54044 | 54748 | WalR | 1.23e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| EJPMIEJG_3 | 154999 | 154802 | CspR | 2.41e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| EJPMIEJG_44 | 8850 | 9908 | repUS75 | 1059 / 1059 | 100.00 | CP002393 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EJPMIEJG_1 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_2 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_3 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_4 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_5 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_6 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_7 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_8 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_9 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_10 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_11 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_12 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_13 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_14 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_15 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_16 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_17 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_18 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_19 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_20 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_21 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_22 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_23 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_24 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_25 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_26 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_27 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_28 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_29 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_30 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_31 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_32 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_33 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_34 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_35 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_36 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_37 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_38 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_39 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_40 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_41 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_42 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_43 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_44 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_45 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_46 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_47 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_48 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_49 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_50 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_51 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_52 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_53 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_54 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_55 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_57 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_58 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_59 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_60 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_61 | 0.0 | 1.0 | 0.0 |
| EJPMIEJG_62 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_64 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_65 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_66 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_67 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_68 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_69 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_71 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_72 | 1.0 | 0.0 | 1.0 |
| EJPMIEJG_73 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EJPMIEJG_2 | 176841 | 183389 | False | Siphoviridae | VOG0205, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556 |
| EJPMIEJG_3 | 97196 | 123896 | False | Siphoviridae | VOG4605, VOG4918, VOG0703, VOG1637, VOG4705, VOG4599, VOG4605, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1887, VOG3434, VOG4555, VOG1300, VOG5616, VOG4564, VOG0720, VOG4544, VOG3699, VOG4570, VOG0198, VOG3307 |
| EJPMIEJG_3 | 125231 | 135300 | False | Unknown | VOG6623, VOG0189, VOG4566, VOG0186, VOG1309, VOG8241, VOG7236, VOG6495, VOG11003, VOG11003, VOG6179, VOG4965, VOG1333, VOG6495 |
Phigaro v2.4.0 (Database: Jan. 2024 release)