Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OMGDDNOA_47 | 11590 | 11393 | CspA | 2.23e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| OMGDDNOA_47 | 11590 | 11393 | CspR | 2.34e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| OMGDDNOA_77 | 1297 | 1839 | rep38 | 543 / 903 | 86.00 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OMGDDNOA_1 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_2 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_3 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_4 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_5 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_6 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_7 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_8 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_9 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_10 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_11 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_12 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_13 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_14 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_15 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_16 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_17 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_18 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_19 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_20 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_21 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_22 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_23 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_24 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_25 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_26 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_27 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_28 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_29 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_30 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_31 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_32 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_33 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_34 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_35 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_36 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_37 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_38 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_39 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_40 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_41 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_42 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_43 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_44 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_45 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_46 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_47 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_48 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_49 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_50 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_51 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_52 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_53 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_54 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_55 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_56 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_57 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_58 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_59 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_60 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_61 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_62 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_63 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_64 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_65 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_66 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_67 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_68 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_69 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_70 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_71 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_72 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_73 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_74 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_75 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_76 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_77 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_78 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_79 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_80 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_81 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_82 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_83 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_84 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_85 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_86 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_87 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_88 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_89 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_90 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_91 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_92 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_93 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_94 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_95 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_96 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_97 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_98 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_99 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_100 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_101 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_102 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_103 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_104 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_105 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_106 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_107 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_108 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_109 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_110 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_111 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_113 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_114 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_115 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_116 | 0.0 | 1.0 | 0.0 |
| OMGDDNOA_117 | 1.0 | 0.0 | 1.0 |
| OMGDDNOA_118 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OMGDDNOA_6 | 3194 | 6592 | False | Unknown | VOG4548, VOG0535, VOG2228, VOG9667 |
| OMGDDNOA_16 | 2688 | 27244 | False | Siphoviridae | VOG7911, VOG4841, VOG4581, VOG1886, VOG4556, VOG4568, VOG0204, VOG0205, VOG4317, VOG0207, VOG4586, VOG0209, VOG7454, VOG0801, VOG3462, VOG10972, VOG0565, VOG9997, VOG4626, VOG4687, VOG1637 |
| OMGDDNOA_21 | 4072 | 12207 | False | Siphoviridae | VOG0275, VOG4677, VOG1159, VOG4585, VOG0275 |
Phigaro v2.4.0 (Database: Jan. 2024 release)