Probiotic potential risk score


ARGs VFs PGs PPRS
0022.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
ENOHFHDF_1304377305081WalR3.48e-114transcriptional regulatory protein84.25100.00EPH95667
ENOHFHDF_54450344697CspR1.30e-29cold shock protein84.6198.48AAO82613
ENOHFHDF_54450344700CspA2.00e-29cold shock protein84.85100.00CAA62903

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
ENOHFHDF_2052136148rep28936 / 936100.00CP005948

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
ENOHFHDF_10.01.00.0
ENOHFHDF_20.01.00.0
ENOHFHDF_30.01.00.0
ENOHFHDF_40.01.00.0
ENOHFHDF_50.01.00.0
ENOHFHDF_60.01.00.0
ENOHFHDF_70.01.00.0
ENOHFHDF_80.01.00.0
ENOHFHDF_90.01.00.0
ENOHFHDF_100.01.00.0
ENOHFHDF_110.01.00.0
ENOHFHDF_120.01.00.0
ENOHFHDF_130.01.00.0
ENOHFHDF_141.00.01.0
ENOHFHDF_151.00.01.0
ENOHFHDF_161.00.01.0
ENOHFHDF_170.01.00.0
ENOHFHDF_180.01.00.0
ENOHFHDF_191.00.01.0
ENOHFHDF_201.00.01.0
ENOHFHDF_211.00.01.0
ENOHFHDF_221.00.01.0
ENOHFHDF_231.00.01.0
ENOHFHDF_251.00.01.0
ENOHFHDF_271.00.01.0
ENOHFHDF_291.00.01.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
ENOHFHDF_3250922283706FalseSiphoviridaeVOG0054, VOG1637, VOG8294, VOG4705, VOG4334, VOG4612, VOG8438, VOG8704, VOG4619, VOG0801, VOG4910, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG4572, VOG4555, VOG0692, VOG0691, VOG4544, VOG3699, VOG0638, VOG0198, VOG6970, VOG3480, VOG4693, VOG0189, VOG4855, VOG0186, VOG1309, VOG1302, VOG0650, VOG3549
ENOHFHDF_3325921357831FalseSiphoviridaeVOG8137, VOG0602, VOG1637, VOG8917, VOG9997, VOG3498, VOG4619, VOG0801, VOG6163, VOG0541, VOG4586, VOG0704, VOG0539, VOG4589, VOG0562, VOG4553, VOG4573, VOG4556, VOG4844, VOG6154, VOG4694, VOG4673, VOG3643, VOG0586, VOG0327, VOG4609, VOG4632, VOG6545, VOG0322, VOG4548, VOG0321
ENOHFHDF_7139409167203FalseSiphoviridaeVOG0198, VOG3015, VOG1183, VOG0796, VOG4544, VOG0720, VOG4564, VOG10914, VOG3434, VOG1887, VOG4713, VOG1330, VOG0704, VOG4634, VOG1333, VOG1334, VOG4545, VOG1335, VOG10608, VOG3498

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements