Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BEFEEIAE_71 | 11984 | 11787 | CspR | 4.69e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| BEFEEIAE_71 | 11984 | 11787 | CspA | 8.74e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BEFEEIAE_1 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_2 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_3 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_4 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_5 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_6 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_7 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_9 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_10 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_11 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_14 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_15 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_16 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_17 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_18 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_19 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_20 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_21 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_22 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_23 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_25 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_26 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_27 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_28 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_29 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_30 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_31 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_32 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_33 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_35 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_36 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_37 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_38 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_39 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_40 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_41 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_42 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_43 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_44 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_45 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_46 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_48 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_49 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_50 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_51 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_52 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_53 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_54 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_55 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_56 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_57 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_58 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_59 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_60 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_61 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_62 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_63 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_64 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_66 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_68 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_69 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_70 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_71 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_72 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_73 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_74 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_75 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_76 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_77 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_78 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_79 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_80 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_81 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_82 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_83 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_84 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_86 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_87 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_88 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_90 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_91 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_92 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_93 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_94 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_95 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_96 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_97 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_98 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_99 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_100 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_101 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_102 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_103 | 0.0 | 1.0 | 0.0 |
| BEFEEIAE_104 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_106 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_107 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_108 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_111 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_112 | 1.0 | 0.0 | 1.0 |
| BEFEEIAE_113 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BEFEEIAE_91 | 57667 | 71147 | False | Myoviridae | VOG0189, VOG5235, VOG0083, VOG0382, VOG0384, VOG0205, VOG0226, VOG6085 |
Phigaro v2.4.0 (Database: Jan. 2024 release)