Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MKKOJPPN_126 | 67184 | 67888 | WalR | 4.73e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| MKKOJPPN_180 | 1882 | 1688 | CspR | 3.88e-31 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| MKKOJPPN_180 | 1882 | 1685 | CspA | 5.95e-31 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MKKOJPPN_188 | 116 | 1045 | rep28 | 930 / 930 | 97.42 | CP003162 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MKKOJPPN_1 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_2 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_3 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_4 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_5 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_6 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_7 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_8 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_9 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_10 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_11 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_12 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_13 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_14 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_15 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_16 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_17 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_18 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_19 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_20 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_21 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_22 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_24 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_25 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_26 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_27 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_28 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_29 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_30 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_31 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_32 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_33 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_34 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_35 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_36 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_37 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_38 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_39 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_40 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_41 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_42 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_43 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_44 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_45 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_46 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_47 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_48 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_49 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_52 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_53 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_55 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_56 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_57 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_58 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_68 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_69 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_80 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_91 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_102 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_104 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_105 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_106 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_107 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_108 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_109 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_110 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_111 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_112 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_113 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_114 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_115 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_116 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_117 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_118 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_119 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_120 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_121 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_122 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_123 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_124 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_125 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_126 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_127 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_128 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_129 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_130 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_131 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_132 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_133 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_134 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_135 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_136 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_137 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_138 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_139 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_140 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_141 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_142 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_143 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_144 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_145 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_146 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_147 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_148 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_149 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_150 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_151 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_152 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_153 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_154 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_155 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_156 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_157 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_158 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_159 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_160 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_161 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_162 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_163 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_164 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_165 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_166 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_167 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_168 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_169 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_170 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_171 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_172 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_173 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_174 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_175 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_176 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_177 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_178 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_179 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_180 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_181 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_182 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_183 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_184 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_185 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_186 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_187 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_188 | 1.0 | 0.0 | 1.0 |
| MKKOJPPN_189 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_190 | 0.0 | 1.0 | 0.0 |
| MKKOJPPN_191 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MKKOJPPN_109 | 24650 | 43579 | False | Siphoviridae | VOG5616, VOG0796, VOG10227, VOG0720, VOG4564, VOG3434, VOG1887, VOG4713, VOG0723, VOG9583, VOG0799, VOG0725, VOG1323, VOG4545, VOG3949, VOG0801 |
| MKKOJPPN_123 | 2041 | 23407 | False | Siphoviridae | VOG10957, VOG4599, VOG4605, VOG4545, VOG0660, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841 |
| MKKOJPPN_127 | 10476 | 19114 | False | Siphoviridae | VOG5852, VOG4586, VOG0704, VOG0539, VOG4589, VOG0562, VOG4553, VOG4573, VOG4556 |
Phigaro v2.4.0 (Database: Jan. 2024 release)