Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NDGKCOBA_1 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_2 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_3 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_4 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_5 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_6 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_7 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_8 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_9 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_10 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_11 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_12 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_13 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_14 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_15 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_16 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_17 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_18 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_19 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_20 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_21 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_22 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_23 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_24 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_25 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_26 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_27 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_28 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_29 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_30 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_31 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_32 | 1.0 | 0.0 | 1.0 |
| NDGKCOBA_33 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_34 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_35 | 1.0 | 0.0 | 1.0 |
| NDGKCOBA_36 | 1.0 | 0.0 | 1.0 |
| NDGKCOBA_37 | 1.0 | 0.0 | 1.0 |
| NDGKCOBA_38 | 1.0 | 0.0 | 1.0 |
| NDGKCOBA_39 | 1.0 | 0.0 | 1.0 |
| NDGKCOBA_40 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_41 | 1.0 | 0.0 | 1.0 |
| NDGKCOBA_42 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_43 | 1.0 | 0.0 | 1.0 |
| NDGKCOBA_44 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_45 | 1.0 | 0.0 | 1.0 |
| NDGKCOBA_46 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_47 | 1.0 | 0.0 | 1.0 |
| NDGKCOBA_48 | 1.0 | 0.0 | 1.0 |
| NDGKCOBA_49 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_50 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_51 | 0.0 | 1.0 | 0.0 |
| NDGKCOBA_52 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NDGKCOBA_1 | 149420 | 188304 | False | Myoviridae | VOG4705, VOG9945, VOG4783, VOG4687, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG3435, VOG4711, VOG10914, VOG4564, VOG0720, VOG4544, VOG0796, VOG0198, VOG0634, VOG4693, VOG5976, VOG3307, VOG0635, VOG0195, VOG0275, VOG9667, VOG0189, VOG4566, VOG0906, VOG2228, VOG10413, VOG7225, VOG4552, VOG9667, VOG6495, VOG0862, VOG0792, VOG3870 |
| NDGKCOBA_6 | 7997 | 28675 | False | Siphoviridae | VOG0686, VOG9344, VOG0861, VOG7906, VOG6163, VOG4633, VOG4598, VOG0800, VOG1333, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG10914, VOG7533, VOG4564, VOG0720 |
Phigaro v2.4.0 (Database: Jan. 2024 release)