Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GALCONLL_5 | 51569 | 55132 | Bifidobacterium adolescentis rpoB mutants conferring resistance to rifampicin | ARO:3004480 | Bado_rpoB_RIF | 92.65 | 100.08 | NC_008618.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GALCONLL_1 | 0.0 | 1.0 | 0.0 |
| GALCONLL_2 | 0.0 | 1.0 | 0.0 |
| GALCONLL_3 | 0.0 | 1.0 | 0.0 |
| GALCONLL_4 | 0.0 | 1.0 | 0.0 |
| GALCONLL_5 | 0.0 | 1.0 | 0.0 |
| GALCONLL_6 | 0.0 | 1.0 | 0.0 |
| GALCONLL_7 | 0.0 | 1.0 | 0.0 |
| GALCONLL_8 | 0.0 | 1.0 | 0.0 |
| GALCONLL_9 | 0.0 | 1.0 | 0.0 |
| GALCONLL_10 | 0.0 | 1.0 | 0.0 |
| GALCONLL_11 | 0.0 | 1.0 | 0.0 |
| GALCONLL_12 | 0.0 | 1.0 | 0.0 |
| GALCONLL_13 | 0.0 | 1.0 | 0.0 |
| GALCONLL_14 | 0.0 | 1.0 | 0.0 |
| GALCONLL_15 | 0.0 | 1.0 | 0.0 |
| GALCONLL_16 | 0.0 | 1.0 | 0.0 |
| GALCONLL_17 | 0.0 | 1.0 | 0.0 |
| GALCONLL_18 | 0.0 | 1.0 | 0.0 |
| GALCONLL_19 | 0.0 | 1.0 | 0.0 |
| GALCONLL_20 | 0.0 | 1.0 | 0.0 |
| GALCONLL_21 | 0.0 | 1.0 | 0.0 |
| GALCONLL_22 | 1.0 | 0.0 | 1.0 |
| GALCONLL_23 | 0.0 | 1.0 | 0.0 |
| GALCONLL_24 | 0.0 | 1.0 | 0.0 |
| GALCONLL_25 | 0.0 | 1.0 | 0.0 |
| GALCONLL_26 | 0.0 | 1.0 | 0.0 |
| GALCONLL_27 | 0.0 | 1.0 | 0.0 |
| GALCONLL_28 | 0.0 | 1.0 | 0.0 |
| GALCONLL_29 | 0.0 | 1.0 | 0.0 |
| GALCONLL_30 | 0.0 | 1.0 | 0.0 |
| GALCONLL_31 | 0.0 | 1.0 | 0.0 |
| GALCONLL_32 | 0.0 | 1.0 | 0.0 |
| GALCONLL_33 | 0.0 | 1.0 | 0.0 |
| GALCONLL_34 | 0.0 | 1.0 | 0.0 |
| GALCONLL_35 | 0.0 | 1.0 | 0.0 |
| GALCONLL_36 | 0.0 | 1.0 | 0.0 |
| GALCONLL_37 | 0.0 | 1.0 | 0.0 |
| GALCONLL_38 | 0.0 | 1.0 | 0.0 |
| GALCONLL_39 | 0.0 | 1.0 | 0.0 |
| GALCONLL_40 | 0.0 | 1.0 | 0.0 |
| GALCONLL_41 | 0.0 | 1.0 | 0.0 |
| GALCONLL_42 | 0.0 | 1.0 | 0.0 |
| GALCONLL_43 | 0.0 | 1.0 | 0.0 |
| GALCONLL_44 | 0.0 | 1.0 | 0.0 |
| GALCONLL_45 | 0.0 | 1.0 | 0.0 |
| GALCONLL_46 | 0.0 | 1.0 | 0.0 |
| GALCONLL_47 | 0.0 | 1.0 | 0.0 |
| GALCONLL_48 | 0.0 | 1.0 | 0.0 |
| GALCONLL_49 | 0.0 | 1.0 | 0.0 |
| GALCONLL_50 | 0.0 | 1.0 | 0.0 |
| GALCONLL_51 | 0.0 | 1.0 | 0.0 |
| GALCONLL_52 | 0.0 | 1.0 | 0.0 |
| GALCONLL_53 | 1.0 | 0.0 | 1.0 |
| GALCONLL_54 | 1.0 | 0.0 | 1.0 |
| GALCONLL_55 | 0.0 | 1.0 | 0.0 |
| GALCONLL_56 | 1.0 | 0.0 | 1.0 |
| GALCONLL_57 | 0.0 | 1.0 | 0.0 |
| GALCONLL_58 | 0.0 | 1.0 | 0.0 |
| GALCONLL_59 | 0.0 | 1.0 | 0.0 |
| GALCONLL_60 | 0.0 | 1.0 | 0.0 |
| GALCONLL_61 | 0.0 | 1.0 | 0.0 |
| GALCONLL_62 | 0.0 | 1.0 | 0.0 |
| GALCONLL_64 | 0.0 | 1.0 | 0.0 |
| GALCONLL_65 | 1.0 | 0.0 | 1.0 |
| GALCONLL_66 | 0.0 | 1.0 | 0.0 |
| GALCONLL_67 | 0.0 | 1.0 | 0.0 |
| GALCONLL_68 | 1.0 | 0.0 | 1.0 |
| GALCONLL_69 | 0.0 | 1.0 | 0.0 |
| GALCONLL_70 | 1.0 | 0.0 | 1.0 |
| GALCONLL_71 | 1.0 | 0.0 | 1.0 |
| GALCONLL_72 | 1.0 | 0.0 | 1.0 |
| GALCONLL_73 | 0.0 | 1.0 | 0.0 |
| GALCONLL_74 | 0.0 | 1.0 | 0.0 |
| GALCONLL_75 | 0.0 | 1.0 | 0.0 |
| GALCONLL_77 | 0.0 | 1.0 | 0.0 |
| GALCONLL_78 | 0.0 | 1.0 | 0.0 |
| GALCONLL_79 | 0.0 | 1.0 | 0.0 |
| GALCONLL_80 | 1.0 | 0.0 | 1.0 |
| GALCONLL_81 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GALCONLL_24 | 19294 | 37834 | False | Siphoviridae | VOG2538, VOG2038, VOG2043, VOG6570, VOG4544, VOG6443, VOG4556, VOG4568, VOG4553, VOG1210, VOG1158, VOG1159, VOG4621, VOG6320, VOG4545, VOG3653 |
| GALCONLL_25 | 3123 | 9667 | False | Siphoviridae | VOG7246, VOG3998, VOG4602, VOG3477, VOG0275 |
| GALCONLL_38 | 2742 | 13964 | False | Siphoviridae | VOG9570, VOG9762, VOG5588, VOG5589, VOG5587, VOG4568, VOG4556, VOG4544 |
Phigaro v2.4.0 (Database: Jan. 2024 release)