Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KLNALEFB_10 | 25343 | 25149 | CspA | 7.18e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KLNALEFB_1 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_2 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_3 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_4 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_5 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_6 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_7 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_8 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_9 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_10 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_11 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_12 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_13 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_14 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_15 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_16 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_17 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_18 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_19 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_20 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_21 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_22 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_23 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_24 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_25 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_26 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_27 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_28 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_29 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_30 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_31 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_32 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_33 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_34 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_35 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_36 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_37 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_38 | 1.0 | 0.0 | 1.0 |
| KLNALEFB_39 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_40 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_41 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_42 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_43 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_44 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_45 | 1.0 | 0.0 | 1.0 |
| KLNALEFB_46 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_47 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_48 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_49 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_50 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_51 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_52 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_53 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_54 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_55 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_56 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_57 | 1.0 | 0.0 | 1.0 |
| KLNALEFB_58 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_59 | 1.0 | 0.0 | 1.0 |
| KLNALEFB_60 | 1.0 | 0.0 | 1.0 |
| KLNALEFB_61 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_62 | 1.0 | 0.0 | 1.0 |
| KLNALEFB_63 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_64 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_65 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_66 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_67 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_69 | 1.0 | 0.0 | 1.0 |
| KLNALEFB_70 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_71 | 1.0 | 0.0 | 1.0 |
| KLNALEFB_72 | 1.0 | 0.0 | 1.0 |
| KLNALEFB_73 | 1.0 | 0.0 | 1.0 |
| KLNALEFB_75 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_77 | 1.0 | 0.0 | 1.0 |
| KLNALEFB_78 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_79 | 1.0 | 0.0 | 1.0 |
| KLNALEFB_80 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_81 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_82 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_83 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_86 | 0.0 | 1.0 | 0.0 |
| KLNALEFB_87 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KLNALEFB_8 | 31631 | 63214 | False | Siphoviridae | VOG4393, VOG2842, VOG11075, VOG8904, VOG4824, VOG0703, VOG0641, VOG8438, VOG4405, VOG3462, VOG0801, VOG6163, VOG9471, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG4553, VOG4568, VOG4556, VOG0202, VOG4544, VOG4581, VOG4841, VOG0866, VOG0198, VOG7111, VOG6140, VOG0686, VOG5317, VOG5562, VOG5998 |
Phigaro v2.4.0 (Database: Jan. 2024 release)