Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DFFDBINO_52 | 802 | 2724 | tet(W) | ARO:3000194 | tet(W) | 96.87 | 100.16 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DFFDBINO_52 | 802 | 2714 | tet(W) | Doxycycline, Tetracycline, Minocycline | 99.01 | 99.64 | FN396364 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DFFDBINO_52 | 802 | 2715 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | BLASTX | 99.53 | 99.84 | WP_000691721.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DFFDBINO_6 | 29029 | 29223 | CspA | 7.84e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| DFFDBINO_49 | 10551 | 11327 | rep30 | 777 / 777 | 92.54 | CP002845 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DFFDBINO_1 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_2 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_3 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_4 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_5 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_6 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_7 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_8 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_9 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_10 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_11 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_12 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_13 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_14 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_15 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_16 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_17 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_18 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_19 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_20 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_21 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_22 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_23 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_24 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_25 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_26 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_27 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_28 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_29 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_30 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_31 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_32 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_33 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_34 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_35 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_36 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_37 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_38 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_39 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_40 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_41 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_42 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_43 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_44 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_45 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_46 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_47 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_48 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_49 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_50 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_51 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_52 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_53 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_54 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_55 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_56 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_57 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_58 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_59 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_60 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_61 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_62 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_63 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_64 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_65 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_66 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_67 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_68 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_69 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_70 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_71 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_72 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_73 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_74 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_75 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_77 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_78 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_79 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_80 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_81 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_82 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_83 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_84 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_85 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_87 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_88 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_89 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_90 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_91 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_92 | 0.0 | 1.0 | 0.0 |
| DFFDBINO_94 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_95 | 1.0 | 0.0 | 1.0 |
| DFFDBINO_97 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)