Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AALFAMIN_10 | 25342 | 25148 | CspA | 7.18e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AALFAMIN_1 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_2 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_3 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_4 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_5 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_6 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_7 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_8 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_9 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_10 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_11 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_12 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_13 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_14 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_15 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_16 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_17 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_18 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_19 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_20 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_21 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_22 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_23 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_24 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_25 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_26 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_27 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_28 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_29 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_30 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_31 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_32 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_33 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_34 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_35 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_36 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_37 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_38 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_39 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_40 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_41 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_42 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_43 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_44 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_45 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_46 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_47 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_48 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_49 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_50 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_51 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_52 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_53 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_54 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_55 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_56 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_57 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_58 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_59 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_60 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_61 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_62 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_63 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_64 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_65 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_66 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_67 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_68 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_69 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_70 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_71 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_72 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_73 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_75 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_76 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_77 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_78 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_79 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_80 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_81 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_83 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_84 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_85 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_86 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_87 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_88 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_89 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_90 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_91 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_92 | 0.0 | 1.0 | 0.0 |
| AALFAMIN_93 | 1.0 | 0.0 | 1.0 |
| AALFAMIN_95 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AALFAMIN_11 | 6016 | 44986 | False | Siphoviridae | VOG4694, VOG0348, VOG9888, VOG4821, VOG0010, VOG9667, VOG6987, VOG2228, VOG0195, VOG0275, VOG5278, VOG5998, VOG5562, VOG5280, VOG5317, VOG0686, VOG7111, VOG0198, VOG1315, VOG6289, VOG0866, VOG4841, VOG4581, VOG9312, VOG0866, VOG1886, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG0209, VOG6163, VOG0801, VOG3462, VOG5560, VOG8438, VOG1505, VOG4705, VOG1637, VOG0703 |
Phigaro v2.4.0 (Database: Jan. 2024 release)