Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JECGIADN_7 | 45696 | 45890 | CspA | 8.25e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JECGIADN_1 | 0.0 | 1.0 | 0.0 |
| JECGIADN_2 | 0.0 | 1.0 | 0.0 |
| JECGIADN_3 | 0.0 | 1.0 | 0.0 |
| JECGIADN_4 | 0.0 | 1.0 | 0.0 |
| JECGIADN_5 | 0.0 | 1.0 | 0.0 |
| JECGIADN_6 | 0.0 | 1.0 | 0.0 |
| JECGIADN_7 | 0.0 | 1.0 | 0.0 |
| JECGIADN_8 | 0.0 | 1.0 | 0.0 |
| JECGIADN_9 | 0.0 | 1.0 | 0.0 |
| JECGIADN_10 | 0.0 | 1.0 | 0.0 |
| JECGIADN_11 | 0.0 | 1.0 | 0.0 |
| JECGIADN_12 | 0.0 | 1.0 | 0.0 |
| JECGIADN_13 | 0.0 | 1.0 | 0.0 |
| JECGIADN_14 | 0.0 | 1.0 | 0.0 |
| JECGIADN_15 | 0.0 | 1.0 | 0.0 |
| JECGIADN_16 | 0.0 | 1.0 | 0.0 |
| JECGIADN_17 | 0.0 | 1.0 | 0.0 |
| JECGIADN_18 | 0.0 | 1.0 | 0.0 |
| JECGIADN_19 | 0.0 | 1.0 | 0.0 |
| JECGIADN_20 | 0.0 | 1.0 | 0.0 |
| JECGIADN_21 | 0.0 | 1.0 | 0.0 |
| JECGIADN_22 | 0.0 | 1.0 | 0.0 |
| JECGIADN_23 | 0.0 | 1.0 | 0.0 |
| JECGIADN_24 | 0.0 | 1.0 | 0.0 |
| JECGIADN_25 | 0.0 | 1.0 | 0.0 |
| JECGIADN_26 | 0.0 | 1.0 | 0.0 |
| JECGIADN_27 | 0.0 | 1.0 | 0.0 |
| JECGIADN_28 | 0.0 | 1.0 | 0.0 |
| JECGIADN_29 | 0.0 | 1.0 | 0.0 |
| JECGIADN_30 | 0.0 | 1.0 | 0.0 |
| JECGIADN_31 | 0.0 | 1.0 | 0.0 |
| JECGIADN_32 | 0.0 | 1.0 | 0.0 |
| JECGIADN_33 | 0.0 | 1.0 | 0.0 |
| JECGIADN_34 | 0.0 | 1.0 | 0.0 |
| JECGIADN_35 | 0.0 | 1.0 | 0.0 |
| JECGIADN_36 | 0.0 | 1.0 | 0.0 |
| JECGIADN_37 | 0.0 | 1.0 | 0.0 |
| JECGIADN_38 | 0.0 | 1.0 | 0.0 |
| JECGIADN_39 | 0.0 | 1.0 | 0.0 |
| JECGIADN_40 | 0.0 | 1.0 | 0.0 |
| JECGIADN_41 | 1.0 | 0.0 | 1.0 |
| JECGIADN_42 | 0.0 | 1.0 | 0.0 |
| JECGIADN_43 | 0.0 | 1.0 | 0.0 |
| JECGIADN_44 | 0.0 | 1.0 | 0.0 |
| JECGIADN_45 | 0.0 | 1.0 | 0.0 |
| JECGIADN_46 | 0.0 | 1.0 | 0.0 |
| JECGIADN_47 | 0.0 | 1.0 | 0.0 |
| JECGIADN_48 | 0.0 | 1.0 | 0.0 |
| JECGIADN_49 | 0.0 | 1.0 | 0.0 |
| JECGIADN_50 | 1.0 | 0.0 | 1.0 |
| JECGIADN_51 | 0.0 | 1.0 | 0.0 |
| JECGIADN_52 | 0.0 | 1.0 | 0.0 |
| JECGIADN_53 | 0.0 | 1.0 | 0.0 |
| JECGIADN_54 | 0.0 | 1.0 | 0.0 |
| JECGIADN_55 | 0.0 | 1.0 | 0.0 |
| JECGIADN_56 | 0.0 | 1.0 | 0.0 |
| JECGIADN_57 | 1.0 | 0.0 | 1.0 |
| JECGIADN_58 | 0.0 | 1.0 | 0.0 |
| JECGIADN_59 | 0.0 | 1.0 | 0.0 |
| JECGIADN_60 | 0.0 | 1.0 | 0.0 |
| JECGIADN_61 | 1.0 | 0.0 | 1.0 |
| JECGIADN_62 | 1.0 | 0.0 | 1.0 |
| JECGIADN_63 | 1.0 | 0.0 | 1.0 |
| JECGIADN_64 | 0.0 | 1.0 | 0.0 |
| JECGIADN_65 | 0.0 | 1.0 | 0.0 |
| JECGIADN_66 | 0.0 | 1.0 | 0.0 |
| JECGIADN_67 | 0.0 | 1.0 | 0.0 |
| JECGIADN_68 | 0.0 | 1.0 | 0.0 |
| JECGIADN_69 | 0.0 | 1.0 | 0.0 |
| JECGIADN_71 | 1.0 | 0.0 | 1.0 |
| JECGIADN_72 | 1.0 | 0.0 | 1.0 |
| JECGIADN_73 | 1.0 | 0.0 | 1.0 |
| JECGIADN_74 | 0.0 | 1.0 | 0.0 |
| JECGIADN_75 | 1.0 | 0.0 | 1.0 |
| JECGIADN_77 | 0.0 | 1.0 | 0.0 |
| JECGIADN_78 | 0.0 | 1.0 | 0.0 |
| JECGIADN_79 | 1.0 | 0.0 | 1.0 |
| JECGIADN_80 | 1.0 | 0.0 | 1.0 |
| JECGIADN_81 | 0.0 | 1.0 | 0.0 |
| JECGIADN_82 | 1.0 | 0.0 | 1.0 |
| JECGIADN_83 | 1.0 | 0.0 | 1.0 |
| JECGIADN_85 | 1.0 | 0.0 | 1.0 |
| JECGIADN_86 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)