Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 2 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MNBEHLNO_10 | 28505 | 30424 | tet(M) | ARO:3000186 | tet(M) | 94.37 | 100.00 | AB039845.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MNBEHLNO_10 | 28505 | 30424 | tet(M) | Doxycycline, Tetracycline, Minocycline | 99.27 | 100.00 | EU182585 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MNBEHLNO_10 | 28505 | 30421 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | BLASTX | 99.06 | 100.00 | WP_002364936.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MNBEHLNO_20 | 20070 | 19363 | WalR | 3.55e-117 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |
| MNBEHLNO_32 | 20576 | 20773 | CspR | 3.49e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| MNBEHLNO_32 | 20576 | 20770 | CspA | 1.70e-28 | cold shock protein | 81.54 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MNBEHLNO_10 | 19026 | 20231 | repUS43 | 1206 / 1206 | 99.83 | CP003584 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MNBEHLNO_1 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_2 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_3 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_4 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_5 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_6 | 1.0 | 0.0 | 1.0 |
| MNBEHLNO_7 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_8 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_9 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_10 | 1.0 | 0.0 | 1.0 |
| MNBEHLNO_11 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_12 | 1.0 | 0.0 | 1.0 |
| MNBEHLNO_13 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_14 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_15 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_16 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_17 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_18 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_19 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_20 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_21 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_22 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_23 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_24 | 1.0 | 0.0 | 1.0 |
| MNBEHLNO_25 | 1.0 | 0.0 | 1.0 |
| MNBEHLNO_26 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_27 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_28 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_29 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_30 | 1.0 | 0.0 | 1.0 |
| MNBEHLNO_31 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_32 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_33 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_34 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_35 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_36 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_37 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_38 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_39 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_40 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_41 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_42 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_43 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_44 | 1.0 | 0.0 | 1.0 |
| MNBEHLNO_45 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_46 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_47 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_48 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_49 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_50 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_51 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_52 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_53 | 1.0 | 0.0 | 1.0 |
| MNBEHLNO_54 | 1.0 | 0.0 | 1.0 |
| MNBEHLNO_55 | 1.0 | 0.0 | 1.0 |
| MNBEHLNO_56 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_57 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_58 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_59 | 1.0 | 0.0 | 1.0 |
| MNBEHLNO_61 | 1.0 | 0.0 | 1.0 |
| MNBEHLNO_62 | 1.0 | 0.0 | 1.0 |
| MNBEHLNO_63 | 1.0 | 0.0 | 1.0 |
| MNBEHLNO_65 | 0.0 | 1.0 | 0.0 |
| MNBEHLNO_66 | 1.0 | 0.0 | 1.0 |
| MNBEHLNO_67 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MNBEHLNO_1 | 1820 | 12357 | False | Siphoviridae | VOG9583, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0638, VOG8681, VOG3477, VOG0376, VOG2545 |
| MNBEHLNO_11 | 3266 | 34766 | False | Siphoviridae | VOG7521, VOG4619, VOG0801, VOG5793, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG4555, VOG5847, VOG0692, VOG0691, VOG4544, VOG3699, VOG0198, VOG0637, VOG7265, VOG4693, VOG7264, VOG4548, VOG5317, VOG5280, VOG7263, VOG0322, VOG0083, VOG1563, VOG11003, VOG8520 |
Phigaro v2.4.0 (Database: Jan. 2024 release)