Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NILKBJOB_16 | 18849 | 19556 | WalR | 1.30e-116 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |
| NILKBJOB_14 | 20609 | 20806 | CspR | 6.25e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| NILKBJOB_14 | 20609 | 20803 | CspA | 3.05e-28 | cold shock protein | 81.54 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NILKBJOB_1 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_2 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_3 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_4 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_5 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_6 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_7 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_8 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_9 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_10 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_11 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_12 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_13 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_14 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_15 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_16 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_17 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_18 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_19 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_20 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_21 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_22 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_23 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_24 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_25 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_26 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_27 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_28 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_29 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_30 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_31 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_32 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_33 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_34 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_35 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_36 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_37 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_38 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_39 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_40 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_41 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_42 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_43 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_44 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_45 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_46 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_47 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_48 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_49 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_50 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_51 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_52 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_53 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_54 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_55 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_56 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_57 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_58 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_59 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_61 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_62 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_63 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_64 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_65 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_66 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_67 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_68 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_69 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_70 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_71 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_72 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_73 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_74 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_75 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_76 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_77 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_78 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_79 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_80 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_81 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_82 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_84 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_85 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_87 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_88 | 0.0 | 1.0 | 0.0 |
| NILKBJOB_89 | 1.0 | 0.0 | 1.0 |
| NILKBJOB_90 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NILKBJOB_6 | 11617 | 36399 | False | Siphoviridae | VOG1637, VOG10223, VOG4705, VOG4334, VOG6540, VOG10868, VOG4856, VOG0643, VOG3462, VOG0801, VOG4545, VOG5852, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG4553, VOG4573, VOG4556, VOG1886, VOG4581, VOG4841, VOG7894, VOG6409, VOG1724 |
| NILKBJOB_6 | 43914 | 56609 | False | Myoviridae | VOG0221, VOG3468, VOG4606, VOG4577, VOG6545, VOG0322, VOG0327, VOG5014, VOG1024, VOG4548, VOG10904, VOG10109, VOG2228, VOG4552 |
| NILKBJOB_7 | 7330 | 14181 | False | Siphoviridae | VOG4602, VOG8520, VOG8520, VOG9667, VOG0831, VOG6125, VOG8353, VOG4632, VOG4999 |
Phigaro v2.4.0 (Database: Jan. 2024 release)