Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EGNBBHIJ_16 | 20250 | 19543 | WalR | 1.32e-116 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |
| EGNBBHIJ_14 | 20609 | 20806 | CspR | 6.25e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| EGNBBHIJ_14 | 20609 | 20803 | CspA | 3.05e-28 | cold shock protein | 81.54 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EGNBBHIJ_1 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_2 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_3 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_4 | 1.0 | 0.0 | 1.0 |
| EGNBBHIJ_5 | 1.0 | 0.0 | 1.0 |
| EGNBBHIJ_6 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_7 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_8 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_9 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_10 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_11 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_12 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_13 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_14 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_15 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_16 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_17 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_18 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_19 | 1.0 | 0.0 | 1.0 |
| EGNBBHIJ_20 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_21 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_22 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_23 | 1.0 | 0.0 | 1.0 |
| EGNBBHIJ_24 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_25 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_26 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_27 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_28 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_29 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_30 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_31 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_32 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_33 | 1.0 | 0.0 | 1.0 |
| EGNBBHIJ_34 | 1.0 | 0.0 | 1.0 |
| EGNBBHIJ_35 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_36 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_37 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_38 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_39 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_40 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_41 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_42 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_43 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_44 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_45 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_46 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_47 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_48 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_49 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_50 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_51 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_52 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_53 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_54 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_55 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_56 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_57 | 1.0 | 0.0 | 1.0 |
| EGNBBHIJ_58 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_59 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_60 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_61 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_62 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_63 | 1.0 | 0.0 | 1.0 |
| EGNBBHIJ_64 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_65 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_66 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_67 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_68 | 1.0 | 0.0 | 1.0 |
| EGNBBHIJ_69 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_70 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_71 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_72 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_73 | 1.0 | 0.0 | 1.0 |
| EGNBBHIJ_74 | 1.0 | 0.0 | 1.0 |
| EGNBBHIJ_75 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_76 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_77 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_78 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_79 | 0.0 | 1.0 | 0.0 |
| EGNBBHIJ_81 | 1.0 | 0.0 | 1.0 |
| EGNBBHIJ_83 | 1.0 | 0.0 | 1.0 |
| EGNBBHIJ_84 | 1.0 | 0.0 | 1.0 |
| EGNBBHIJ_85 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EGNBBHIJ_7 | 14656 | 27351 | False | Myoviridae | VOG4552, VOG4552, VOG2228, VOG10109, VOG10904, VOG4548, VOG1024, VOG5014, VOG0327, VOG0322, VOG6545, VOG4577, VOG4606, VOG3468 |
| EGNBBHIJ_7 | 34866 | 59648 | False | Siphoviridae | VOG1724, VOG6409, VOG7894, VOG4841, VOG4581, VOG1886, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG5852, VOG4545, VOG0801, VOG3462, VOG0643, VOG4856, VOG10868, VOG6540, VOG4334, VOG4705, VOG10223 |
| EGNBBHIJ_9 | 7414 | 14265 | False | Siphoviridae | VOG4602, VOG8520, VOG8520, VOG9667, VOG0831, VOG6125, VOG8353, VOG4632, VOG4999 |
Phigaro v2.4.0 (Database: Jan. 2024 release)