Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FNAIBJLH_116 | 137444 | 138148 | WalR | 1.86e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| FNAIBJLH_182 | 35088 | 35282 | CspR | 5.34e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| FNAIBJLH_182 | 35088 | 35285 | CspA | 8.19e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FNAIBJLH_133 | 543 | 1478 | rep28 | 936 / 936 | 99.36 | CP005948 |
| FNAIBJLH_114 | 4028 | 4572 | rep38 | 550 / 903 | 89.45 | CP005943 |
| FNAIBJLH_140 | 4247 | 5202 | repUS64 | 959 / 954 | 81.13 | JN601038 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FNAIBJLH_11 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_22 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_33 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_43 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_54 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_65 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_76 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_87 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_98 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_104 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_105 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_106 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_107 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_108 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_109 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_110 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_111 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_112 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_113 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_114 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_115 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_116 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_117 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_118 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_119 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_120 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_121 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_122 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_123 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_124 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_125 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_126 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_127 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_128 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_129 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_130 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_131 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_132 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_133 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_134 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_135 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_136 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_137 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_138 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_139 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_140 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_141 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_142 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_143 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_144 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_145 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_146 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_147 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_148 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_149 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_152 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_153 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_154 | 1.0 | 0.0 | 1.0 |
| FNAIBJLH_160 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_171 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_182 | 0.0 | 1.0 | 0.0 |
| FNAIBJLH_193 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FNAIBJLH_43 | 28431 | 61204 | False | Siphoviridae | VOG8925, VOG0321, VOG10904, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG0327, VOG1298, VOG0044, VOG3307, VOG1049, VOG0052, VOG6154, VOG4844, VOG4556, VOG4573, VOG4553, VOG0562, VOG4589, VOG0539, VOG0704, VOG4586, VOG0541, VOG6163, VOG0801, VOG4619, VOG3498, VOG9997, VOG8917, VOG9888 |
| FNAIBJLH_105 | 93869 | 104601 | False | Siphoviridae | VOG0198, VOG0204, VOG4568, VOG4556, VOG2935, VOG4544, VOG4581, VOG4841, VOG0205, VOG6414, VOG4609, VOG4632 |
| FNAIBJLH_109 | 4972 | 19599 | True | Myoviridae | VOG4548, VOG3594, VOG5088, VOG5532, VOG0052, VOG4548, VOG8916, VOG0221, VOG0083 |
| FNAIBJLH_171 | 116522 | 139469 | False | Siphoviridae | VOG9998, VOG8870, VOG10957, VOG4599, VOG4605, VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581 |
| FNAIBJLH_193 | 37980 | 68785 | False | Siphoviridae | VOG0226, VOG4566, VOG4552, VOG4693, VOG9507, VOG5258, VOG0044, VOG0198, VOG9667, VOG5616, VOG3699, VOG0691, VOG0692, VOG9317, VOG4711, VOG0695, VOG0696, VOG0697, VOG6548, VOG9763, VOG0701, VOG6163, VOG0801, VOG4619, VOG4619, VOG4856, VOG0804, VOG7896 |
Phigaro v2.4.0 (Database: Jan. 2024 release)