Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FIDFLPLG_90 | 100595 | 101296 | WalR | 1.51e-108 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FIDFLPLG_1 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_12 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_23 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_34 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_40 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_41 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_42 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_43 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_44 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_45 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_46 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_47 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_48 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_49 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_50 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_51 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_52 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_53 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_54 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_55 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_56 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_57 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_58 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_59 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_60 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_61 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_62 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_63 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_64 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_65 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_66 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_67 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_68 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_69 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_70 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_71 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_72 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_73 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_74 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_75 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_76 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_77 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_78 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_79 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_80 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_81 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_82 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_83 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_84 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_85 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_86 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_88 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_89 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_90 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_91 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_92 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_93 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_94 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_95 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_96 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_97 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_98 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_99 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_100 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_101 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_102 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_103 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_104 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_105 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_106 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_107 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_108 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_109 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_110 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_111 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_112 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_114 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_115 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_116 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_117 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_118 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_119 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_120 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_121 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_122 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_123 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_124 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_125 | 1.0 | 0.0 | 1.0 |
| FIDFLPLG_126 | 0.0 | 1.0 | 0.0 |
| FIDFLPLG_134 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FIDFLPLG_47 | 17584 | 43582 | False | Myoviridae | VOG7896, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG2779, VOG1915, VOG4865, VOG4564, VOG1912, VOG10227, VOG0796, VOG0198 |
| FIDFLPLG_48 | 2660 | 35632 | False | Myoviridae | VOG0703, VOG10608, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG4910, VOG4699, VOG1352, VOG1883, VOG1353, VOG1329, VOG4555, VOG4564, VOG0720, VOG4544, VOG5532, VOG0198, VOG0044, VOG4567, VOG0052, VOG0189, VOG4566, VOG0514, VOG0226, VOG0283, VOG0321, VOG3537 |
| FIDFLPLG_50 | 17116 | 28227 | False | Siphoviridae | VOG4632, VOG4606, VOG0205, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556, VOG4568, VOG0204, VOG0198 |
Phigaro v2.4.0 (Database: Jan. 2024 release)