Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GBOKLDML_112 | 31590 | 31961 | Mycobacterium tuberculosis rpsL mutations conferring resistance to Streptomycin | ARO:3003395 | Mtub_rpsL_STR | 82.93 | 99.19 | NC_000962.3 |
| GBOKLDML_75 | 4203 | 7766 | Bifidobacterium adolescentis rpoB mutants conferring resistance to rifampicin | ARO:3004480 | Bado_rpoB_RIF | 92.48 | 100.08 | NC_008618.1 |
| GBOKLDML_5 | 712 | 2631 | tet(W) | ARO:3000194 | tet(W) | 100.00 | 100.00 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GBOKLDML_5 | 712 | 2631 | tet(W) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | AJ427422 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GBOKLDML_5 | 712 | 2628 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | EXACTX | 100.00 | 100.00 | WP_002586627.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GBOKLDML_1 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_2 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_3 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_4 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_5 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_6 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_7 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_8 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_9 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_10 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_11 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_13 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_14 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_15 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_16 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_17 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_18 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_19 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_20 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_21 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_22 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_23 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_25 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_26 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_33 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_39 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_40 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_41 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_42 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_43 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_44 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_45 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_46 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_47 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_48 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_49 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_50 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_51 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_52 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_53 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_54 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_55 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_56 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_57 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_58 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_59 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_60 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_61 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_62 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_63 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_64 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_65 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_66 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_67 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_68 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_69 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_70 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_71 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_72 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_73 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_74 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_75 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_76 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_77 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_78 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_79 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_80 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_81 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_82 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_83 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_84 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_85 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_86 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_87 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_88 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_89 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_90 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_91 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_92 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_93 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_94 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_95 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_96 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_97 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_98 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_99 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_100 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_101 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_102 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_103 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_104 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_105 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_106 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_107 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_108 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_109 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_110 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_111 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_112 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_113 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_114 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_115 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_116 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_117 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_118 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_119 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_120 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_121 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_122 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_123 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_124 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_125 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_126 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_127 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_128 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_129 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_130 | 1.0 | 0.0 | 1.0 |
| GBOKLDML_131 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_132 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_133 | 0.0 | 1.0 | 0.0 |
| GBOKLDML_134 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)