Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ANCGMINP_1 | 73586 | 72882 | WalR | 1.06e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| ANCGMINP_3 | 27397 | 27591 | CspR | 5.00e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| ANCGMINP_3 | 27397 | 27594 | CspA | 7.66e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| ANCGMINP_68 | 2745 | 3680 | rep28 | 936 / 936 | 99.89 | CP005948 |
| ANCGMINP_58 | 2576 | 3466 | rep38 | 902 / 903 | 96.23 | CP005943 |
| ANCGMINP_97 | 2957 | 3879 | repUS73 | 938 / 1101 | 80.06 | CP002654 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ANCGMINP_1 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_2 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_3 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_4 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_5 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_6 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_7 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_8 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_9 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_10 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_11 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_12 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_13 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_14 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_15 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_16 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_17 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_18 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_19 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_20 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_21 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_22 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_23 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_24 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_25 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_26 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_27 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_28 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_29 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_30 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_31 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_32 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_33 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_34 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_35 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_36 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_37 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_38 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_39 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_40 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_41 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_42 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_43 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_44 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_45 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_46 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_47 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_48 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_49 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_50 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_51 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_52 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_53 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_54 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_55 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_56 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_57 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_58 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_59 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_60 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_61 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_62 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_63 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_64 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_65 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_66 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_67 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_68 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_69 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_70 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_71 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_72 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_73 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_74 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_75 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_76 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_77 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_78 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_79 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_80 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_81 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_82 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_83 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_84 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_85 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_86 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_87 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_88 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_89 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_90 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_91 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_92 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_93 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_94 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_95 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_97 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_98 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_99 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_100 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_101 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_102 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_103 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_104 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_105 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_106 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_107 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_108 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_109 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_110 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_111 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_112 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_113 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_114 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_115 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_116 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_117 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_118 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_119 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_120 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_121 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_122 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_123 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_124 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_125 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_126 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_127 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_128 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_130 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_131 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_132 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_133 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_134 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_135 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_136 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_137 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_138 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_139 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_140 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_141 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_142 | 0.0 | 1.0 | 0.0 |
| ANCGMINP_143 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_144 | 1.0 | 0.0 | 1.0 |
| ANCGMINP_145 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ANCGMINP_2 | 64122 | 90570 | False | Siphoviridae | VOG10957, VOG4599, VOG4605, VOG5631, VOG0660, VOG5852, VOG4586, VOG0207, VOG9583, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG7540, VOG1886, VOG4581, VOG4841, VOG0531, VOG0198, VOG0044, VOG1298 |
| ANCGMINP_7 | 47839 | 74800 | False | Siphoviridae | VOG0753, VOG8294, VOG4705, VOG0804, VOG0870, VOG8438, VOG1637, VOG4619, VOG0801, VOG6163, VOG0701, VOG9763, VOG6548, VOG0697, VOG0696, VOG0695, VOG4711, VOG9317, VOG0692, VOG0691, VOG0611, VOG0045, VOG0198, VOG3643, VOG0044 |
| ANCGMINP_15 | 34653 | 57850 | False | Siphoviridae | VOG3443, VOG1191, VOG8294, VOG0602, VOG9888, VOG8917, VOG9997, VOG3498, VOG4619, VOG0801, VOG6163, VOG0541, VOG4586, VOG0704, VOG0539, VOG4589, VOG0562, VOG4553, VOG4573, VOG4556, VOG4844 |
| ANCGMINP_40 | 3181 | 26386 | False | Siphoviridae | VOG8294, VOG3498, VOG10608, VOG1335, VOG4545, VOG1334, VOG1333, VOG4634, VOG0704, VOG1330, VOG4713, VOG1887, VOG3434, VOG10914, VOG4564 |
Phigaro v2.4.0 (Database: Jan. 2024 release)