Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BHDBFBGB_1 | 73586 | 72882 | WalR | 1.06e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| BHDBFBGB_3 | 27397 | 27591 | CspR | 5.00e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| BHDBFBGB_3 | 27397 | 27594 | CspA | 7.66e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BHDBFBGB_67 | 2747 | 3682 | rep28 | 936 / 936 | 99.89 | CP005948 |
| BHDBFBGB_58 | 2576 | 3466 | rep38 | 902 / 903 | 96.23 | CP005943 |
| BHDBFBGB_96 | 2957 | 3879 | repUS73 | 938 / 1101 | 80.06 | CP002654 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BHDBFBGB_1 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_2 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_3 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_4 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_5 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_6 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_7 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_8 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_9 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_10 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_11 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_12 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_13 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_14 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_15 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_16 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_17 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_18 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_19 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_20 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_21 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_22 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_23 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_24 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_25 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_26 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_27 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_28 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_29 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_30 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_31 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_32 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_33 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_34 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_35 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_36 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_37 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_38 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_39 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_40 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_41 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_42 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_43 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_44 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_45 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_46 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_47 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_48 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_49 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_50 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_51 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_52 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_53 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_54 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_55 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_56 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_57 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_58 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_59 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_60 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_61 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_62 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_63 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_64 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_65 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_66 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_67 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_68 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_69 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_70 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_71 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_72 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_73 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_74 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_75 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_76 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_77 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_78 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_79 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_80 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_81 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_82 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_83 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_84 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_85 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_86 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_87 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_88 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_89 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_90 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_91 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_92 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_93 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_94 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_96 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_97 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_98 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_99 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_100 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_101 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_102 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_103 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_104 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_105 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_106 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_107 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_108 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_109 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_110 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_111 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_112 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_113 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_114 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_115 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_116 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_117 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_118 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_119 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_120 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_121 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_122 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_123 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_124 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_125 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_126 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_127 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_128 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_130 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_131 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_132 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_133 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_134 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_135 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_136 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_137 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_138 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_139 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_140 | 0.0 | 1.0 | 0.0 |
| BHDBFBGB_141 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_142 | 1.0 | 0.0 | 1.0 |
| BHDBFBGB_143 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BHDBFBGB_2 | 74445 | 100893 | False | Siphoviridae | VOG1298, VOG0044, VOG0198, VOG0531, VOG4841, VOG4581, VOG1886, VOG7540, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG9583, VOG0207, VOG4586, VOG5852, VOG0660, VOG5631, VOG4605, VOG4599, VOG10957 |
| BHDBFBGB_7 | 3718 | 31527 | False | Siphoviridae | VOG1298, VOG3507, VOG0044, VOG3643, VOG0198, VOG0045, VOG0611, VOG0691, VOG0692, VOG9317, VOG4711, VOG0695, VOG0696, VOG0697, VOG6548, VOG9763, VOG0701, VOG6163, VOG0801, VOG4619, VOG1637, VOG8438, VOG0870, VOG0804, VOG4705, VOG8294 |
| BHDBFBGB_16 | 3396 | 26593 | False | Siphoviridae | VOG4844, VOG4556, VOG4573, VOG4553, VOG0562, VOG4589, VOG0539, VOG0704, VOG4586, VOG0541, VOG6163, VOG0801, VOG4619, VOG3498, VOG9997, VOG8917, VOG9888, VOG0602, VOG8294, VOG1191 |
| BHDBFBGB_40 | 3181 | 26386 | False | Siphoviridae | VOG8294, VOG3498, VOG10608, VOG1335, VOG4545, VOG1334, VOG1333, VOG4634, VOG0704, VOG1330, VOG4713, VOG1887, VOG3434, VOG10914, VOG4564 |
Phigaro v2.4.0 (Database: Jan. 2024 release)