Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FEPONPKI_1 | 216584 | 215880 | WalR | 1.71e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| FEPONPKI_4 | 87440 | 87246 | CspR | 6.26e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| FEPONPKI_4 | 87440 | 87243 | CspA | 9.60e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FEPONPKI_78 | 895 | 1830 | rep28 | 936 / 936 | 100.00 | CP005948 |
| FEPONPKI_51 | 2795 | 3685 | rep38 | 902 / 903 | 96.23 | CP005943 |
| FEPONPKI_76 | 635 | 1702 | repUS73 | 1068 / 1101 | 95.32 | CP002654 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FEPONPKI_1 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_2 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_3 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_4 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_5 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_6 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_7 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_8 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_9 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_10 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_11 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_12 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_13 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_14 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_15 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_16 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_17 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_18 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_19 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_20 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_21 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_22 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_23 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_24 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_25 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_26 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_27 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_28 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_29 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_30 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_31 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_32 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_33 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_34 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_35 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_36 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_37 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_38 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_39 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_40 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_41 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_42 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_43 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_44 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_45 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_46 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_47 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_48 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_49 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_50 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_51 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_52 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_53 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_54 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_55 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_56 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_57 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_58 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_59 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_60 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_61 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_62 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_63 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_64 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_65 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_66 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_67 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_68 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_69 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_70 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_71 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_72 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_73 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_74 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_75 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_76 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_77 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_78 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_79 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_80 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_81 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_82 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_83 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_84 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_85 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_86 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_87 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_88 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_89 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_90 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_91 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_92 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_93 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_94 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_95 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_96 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_97 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_98 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_99 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_100 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_101 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_102 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_103 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_104 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_105 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_106 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_107 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_108 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_109 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_111 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_112 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_113 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_115 | 0.0 | 1.0 | 0.0 |
| FEPONPKI_116 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_118 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_119 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_120 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_121 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_122 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_123 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_124 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_125 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_126 | 1.0 | 0.0 | 1.0 |
| FEPONPKI_127 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FEPONPKI_6 | 5524 | 26502 | False | Siphoviridae | VOG4844, VOG4556, VOG4573, VOG4553, VOG0562, VOG4589, VOG0539, VOG0704, VOG4586, VOG0541, VOG6163, VOG0801, VOG4619, VOG3498, VOG8917 |
| FEPONPKI_27 | 7520 | 41600 | False | Siphoviridae | VOG6495, VOG0181, VOG7298, VOG0535, VOG4566, VOG4552, VOG4693, VOG0586, VOG0198, VOG5709, VOG0686, VOG0796, VOG4544, VOG0720, VOG4564, VOG10914, VOG3434, VOG1887, VOG4713, VOG1330, VOG0704, VOG4634, VOG1333, VOG1334, VOG4545, VOG1335, VOG10608, VOG3498 |
| FEPONPKI_37 | 11081 | 22557 | False | Siphoviridae | VOG1298, VOG0586, VOG0044, VOG3643, VOG0198, VOG4581, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205 |
Phigaro v2.4.0 (Database: Jan. 2024 release)