Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MEHHGLLO_3 | 31317 | 30613 | WalR | 6.28e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| MEHHGLLO_35 | 1757 | 1951 | CspR | 1.45e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| MEHHGLLO_35 | 1757 | 1954 | CspA | 2.22e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MEHHGLLO_162 | 513 | 1448 | rep28 | 936 / 936 | 100.00 | CP005948 |
| MEHHGLLO_102 | 508 | 1398 | rep38 | 902 / 903 | 96.23 | CP005943 |
| MEHHGLLO_124 | 248 | 1203 | repUS64 | 959 / 954 | 81.13 | JN601038 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MEHHGLLO_1 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_2 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_3 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_4 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_5 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_6 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_7 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_8 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_9 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_10 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_11 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_12 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_13 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_14 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_15 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_16 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_17 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_18 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_19 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_20 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_21 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_22 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_23 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_24 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_25 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_26 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_27 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_28 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_29 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_30 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_31 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_32 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_33 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_34 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_35 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_36 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_37 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_38 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_39 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_40 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_41 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_42 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_43 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_44 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_45 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_46 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_47 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_48 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_49 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_50 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_51 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_52 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_53 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_54 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_55 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_56 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_57 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_58 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_59 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_60 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_61 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_62 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_63 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_64 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_65 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_66 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_67 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_68 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_69 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_70 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_71 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_72 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_73 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_74 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_75 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_76 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_77 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_78 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_79 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_80 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_81 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_82 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_83 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_84 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_85 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_86 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_87 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_88 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_89 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_90 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_91 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_92 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_93 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_94 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_95 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_96 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_97 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_98 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_99 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_100 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_101 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_102 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_103 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_104 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_105 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_106 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_107 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_108 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_109 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_110 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_111 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_112 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_113 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_114 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_115 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_116 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_117 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_118 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_119 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_120 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_121 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_122 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_123 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_124 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_125 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_126 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_127 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_128 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_129 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_130 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_131 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_132 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_133 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_135 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_136 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_137 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_138 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_139 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_140 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_141 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_142 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_143 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_144 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_145 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_146 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_147 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_148 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_149 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_150 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_151 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_152 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_153 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_154 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_155 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_156 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_157 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_158 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_159 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_160 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_162 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_163 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_164 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_165 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_166 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_167 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_168 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_169 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_170 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_171 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_172 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_173 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_174 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_175 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_176 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_177 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_178 | 0.0 | 1.0 | 0.0 |
| MEHHGLLO_179 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_180 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_181 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_182 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_183 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_184 | 1.0 | 0.0 | 1.0 |
| MEHHGLLO_185 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MEHHGLLO_9 | 6460 | 17751 | False | Siphoviridae | VOG0198, VOG0204, VOG4568, VOG4556, VOG4544, VOG4581, VOG4841, VOG0205, VOG4609, VOG4632 |
| MEHHGLLO_32 | 4145 | 8613 | False | Unknown | VOG3008, VOG0186, VOG1309, VOG0650, VOG3549 |
| MEHHGLLO_47 | 4278 | 18531 | False | Siphoviridae | VOG9998, VOG8870, VOG10957, VOG4599, VOG4605 |
Phigaro v2.4.0 (Database: Jan. 2024 release)