Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FNCAELPN_2 | 132983 | 132279 | WalR | 1.01e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| FNCAELPN_8 | 87538 | 87344 | CspR | 4.88e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| FNCAELPN_8 | 87538 | 87341 | CspA | 7.49e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FNCAELPN_54 | 2972 | 3907 | rep28 | 936 / 936 | 100.00 | CP005948 |
| FNCAELPN_31 | 7249 | 8283 | rep38 | 1044 / 1104 | 81.42 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FNCAELPN_1 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_2 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_3 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_4 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_5 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_6 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_7 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_8 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_9 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_10 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_11 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_12 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_13 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_14 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_15 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_16 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_17 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_18 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_19 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_20 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_21 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_22 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_23 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_24 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_25 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_26 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_27 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_28 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_29 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_30 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_31 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_32 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_33 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_34 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_35 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_36 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_37 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_38 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_39 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_40 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_41 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_42 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_43 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_44 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_45 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_46 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_47 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_48 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_49 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_50 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_51 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_52 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_53 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_54 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_55 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_56 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_57 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_58 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_59 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_60 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_61 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_62 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_63 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_64 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_65 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_66 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_67 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_68 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_69 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_70 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_72 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_73 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_74 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_75 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_76 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_77 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_78 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_79 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_80 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_81 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_82 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_83 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_84 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_85 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_86 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_87 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_88 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_89 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_90 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_91 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_92 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_93 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_94 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_95 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_96 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_97 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_98 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_99 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_100 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_101 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_102 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_103 | 0.0 | 1.0 | 0.0 |
| FNCAELPN_104 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_105 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_106 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_107 | 1.0 | 0.0 | 1.0 |
| FNCAELPN_108 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FNCAELPN_3 | 2790 | 28901 | False | Siphoviridae | VOG4841, VOG4581, VOG1886, VOG7540, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG9583, VOG0207, VOG4586, VOG5852, VOG0660, VOG5631, VOG4605, VOG4599, VOG10957, VOG9998 |
| FNCAELPN_5 | 100257 | 124486 | False | Siphoviridae | VOG9667, VOG3699, VOG0691, VOG0692, VOG9317, VOG4711, VOG0695, VOG0696, VOG0697, VOG6548, VOG8357, VOG0701, VOG6163, VOG0801, VOG4619, VOG4660, VOG0136 |
| FNCAELPN_7 | 9763 | 32001 | False | Siphoviridae | VOG8294, VOG0602, VOG9888, VOG8917, VOG3498, VOG4619, VOG0801, VOG0801, VOG6163, VOG0541, VOG4586, VOG0704, VOG0539, VOG4589, VOG0562, VOG4553, VOG4573, VOG4556, VOG4844 |
| FNCAELPN_7 | 39585 | 47400 | False | Siphoviridae | VOG4609, VOG4632, VOG6545, VOG0322, VOG4548, VOG0321, VOG0181, VOG8222 |
Phigaro v2.4.0 (Database: Jan. 2024 release)