Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 8 | 8.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OGBOAKBL_74 | 17150 | 18301 | tufA | 0.0 | elongation factor Tu | 86.46 | 97.21 | AHM69299 |
| OGBOAKBL_117 | 11253 | 10384 | pdxS | 1.16e-152 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| OGBOAKBL_67 | 136822 | 136046 | CodY | 1.94e-127 | nutrient-responsive regulator | 81.47 | 100.00 | ACJ80679 |
| OGBOAKBL_67 | 136822 | 136046 | codY | 4.69e-124 | global regulator and isoleucine sensor | 80.31 | 100.00 | ASW39076 |
| OGBOAKBL_85 | 76580 | 77149 | ClpP | 4.05e-104 | part of proteolytic complex | 83.68 | 97.44 | BAB94595 |
| OGBOAKBL_77 | 6478 | 6870 | spxA1 | 4.22e-73 | redox-responsive transcription factor | 88.55 | 100.00 | AAF21893 |
| OGBOAKBL_77 | 6478 | 6870 | spx | 9.13e-68 | essential gene which is a thiol/oxidative stress sensor | 80.92 | 100.00 | BAB57159 |
| OGBOAKBL_39 | 32789 | 32547 | SpoVG | 1.95e-39 | RNA-binding protein | 82.72 | 79.41 | AAT02994 |
| OGBOAKBL_32 | 48248 | 48442 | CspA | 1.87e-29 | cold shock protein | 81.54 | 98.48 | CAA62903 |
| OGBOAKBL_67 | 29604 | 29798 | CspD | 2.77e-29 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| OGBOAKBL_67 | 29604 | 29801 | CspB | 1.86e-28 | cold shock protein | 80.30 | 100.00 | CAD00094 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OGBOAKBL_1 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_2 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_3 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_4 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_5 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_6 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_7 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_8 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_9 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_10 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_11 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_12 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_13 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_14 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_15 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_16 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_17 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_18 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_19 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_20 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_21 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_22 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_23 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_24 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_25 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_26 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_27 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_28 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_29 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_30 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_31 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_32 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_33 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_34 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_35 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_36 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_37 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_38 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_39 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_40 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_42 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_43 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_44 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_45 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_46 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_47 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_48 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_49 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_50 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_51 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_52 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_53 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_54 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_55 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_56 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_57 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_58 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_59 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_60 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_62 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_63 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_64 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_65 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_66 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_67 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_69 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_70 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_71 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_72 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_73 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_74 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_75 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_76 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_77 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_78 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_79 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_80 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_81 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_82 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_83 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_84 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_85 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_86 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_87 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_88 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_89 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_90 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_91 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_92 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_93 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_94 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_95 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_96 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_97 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_98 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_99 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_100 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_101 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_102 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_103 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_104 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_105 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_106 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_107 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_108 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_109 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_110 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_111 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_112 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_113 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_114 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_115 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_116 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_117 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_118 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_119 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_120 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_121 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_122 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_123 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_124 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_125 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_126 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_127 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_128 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_129 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_130 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_131 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_132 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_133 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_134 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_135 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_136 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_137 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_138 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_139 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_140 | 1.0 | 0.0 | 1.0 |
| OGBOAKBL_141 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_142 | 0.0 | 1.0 | 0.0 |
| OGBOAKBL_143 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)