Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BIBAFGBA_57 | 13938 | 13741 | CspA | 4.14e-30 | cold shock protein | 86.36 | 100.00 | CAA62903 |
| BIBAFGBA_57 | 13938 | 13744 | CspR | 7.50e-29 | cold shock protein | 84.61 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BIBAFGBA_1 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_2 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_3 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_4 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_5 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_6 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_7 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_8 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_9 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_10 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_11 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_12 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_13 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_14 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_15 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_16 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_17 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_18 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_19 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_20 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_21 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_22 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_24 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_25 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_26 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_28 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_29 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_30 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_31 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_32 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_33 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_34 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_35 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_36 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_37 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_38 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_39 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_40 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_41 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_42 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_43 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_44 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_45 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_46 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_47 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_48 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_49 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_50 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_51 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_52 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_53 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_54 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_55 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_56 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_57 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_58 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_59 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_60 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_61 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_62 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_63 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_64 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_65 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_67 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_68 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_69 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_70 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_71 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_72 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_73 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_74 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_75 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_76 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_77 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_78 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_79 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_80 | 1.0 | 0.0 | 1.0 |
| BIBAFGBA_81 | 0.0 | 1.0 | 0.0 |
| BIBAFGBA_82 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BIBAFGBA_46 | 88486 | 107658 | False | Myoviridae | VOG10457, VOG8295, VOG0025, VOG6085, VOG0226, VOG0205, VOG0384, VOG0382, VOG0083, VOG5235 |
Phigaro v2.4.0 (Database: Jan. 2024 release)