Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| POODIJGJ_56 | 68572 | 68375 | CspR | 1.63e-28 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| POODIJGJ_56 | 68572 | 68375 | CspA | 3.04e-28 | cold shock protein | 80.30 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| POODIJGJ_15 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_16 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_17 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_18 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_20 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_21 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_22 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_23 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_24 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_25 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_27 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_28 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_29 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_30 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_31 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_32 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_33 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_34 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_35 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_36 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_37 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_38 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_39 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_40 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_41 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_42 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_44 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_45 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_47 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_48 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_49 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_50 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_51 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_52 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_54 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_55 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_56 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_58 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_60 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_61 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_62 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_63 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_64 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_65 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_66 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_67 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_68 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_69 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_70 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_72 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_73 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_74 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_75 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_76 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_77 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_78 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_79 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_81 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_82 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_83 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_84 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_85 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_86 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_87 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_88 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_89 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_90 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_91 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_92 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_93 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_94 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_95 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_96 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_97 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_99 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_100 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_101 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_102 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_103 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_104 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_105 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_108 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_109 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_110 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_111 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_112 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_113 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_114 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_115 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_116 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_117 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_118 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_119 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_120 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_121 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_122 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_123 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_125 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_126 | 0.0 | 1.0 | 0.0 |
| POODIJGJ_127 | 1.0 | 0.0 | 1.0 |
| POODIJGJ_128 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| POODIJGJ_32 | 5245 | 24043 | False | Siphoviridae | VOG1047, VOG0021, VOG0026, VOG4606, VOG0327, VOG4548, VOG0198, VOG6154, VOG4581, VOG4571, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG0641 |
| POODIJGJ_70 | 4120 | 33946 | False | Siphoviridae | VOG3622, VOG0650, VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG8685, VOG0536, VOG0198, VOG9920, VOG0796, VOG10227, VOG0720, VOG4564, VOG10904, VOG10914, VOG1319, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG4545, VOG0727, VOG4599, VOG0648 |
Phigaro v2.4.0 (Database: Jan. 2024 release)