Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ENIGFCBG_29 | 22902 | 23273 | Mycobacterium tuberculosis rpsL mutations conferring resistance to Streptomycin | ARO:3003395 | Mtub_rpsL_STR | 82.93 | 99.19 | NC_000962.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ENIGFCBG_1 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_3 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_4 | 1.0 | 0.0 | 1.0 |
| ENIGFCBG_5 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_6 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_7 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_8 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_9 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_10 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_11 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_12 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_13 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_14 | 1.0 | 0.0 | 1.0 |
| ENIGFCBG_15 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_16 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_17 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_18 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_20 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_22 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_23 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_24 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_26 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_27 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_28 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_29 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_30 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_31 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_32 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_33 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_34 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_35 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_36 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_37 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_38 | 1.0 | 0.0 | 1.0 |
| ENIGFCBG_39 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_42 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_43 | 0.0 | 1.0 | 0.0 |
| ENIGFCBG_45 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ENIGFCBG_9 | 117450 | 119382 | False | Unknown | VOG1887 |
| ENIGFCBG_27 | 72200 | 92039 | False | Siphoviridae | VOG1125, VOG5793, VOG4582, VOG3651, VOG4557, VOG4621, VOG1159, VOG3409, VOG1581, VOG5504, VOG4553, VOG4555, VOG4576, VOG0720, VOG4544, VOG1154 |
| ENIGFCBG_36 | 2082 | 7691 | False | Siphoviridae | VOG4552, VOG5091, VOG4567, VOG4552, VOG2038, VOG8271 |
| ENIGFCBG_36 | 374251 | 394712 | False | Siphoviridae | VOG5101, VOG0720, VOG4555, VOG4553, VOG1581, VOG5601, VOG6163, VOG3653, VOG9722, VOG3416, VOG4598, VOG5188 |
Phigaro v2.4.0 (Database: Jan. 2024 release)