Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EAJMKLAK_22 | 97116 | 97850 | ErmG | ARO:3000522 | ErmG | 98.77 | 100.00 | L42817.1 |
| EAJMKLAK_38 | 34623 | 36548 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EAJMKLAK_38 | 34623 | 36548 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| EAJMKLAK_22 | 97116 | 97850 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.32 | 100.00 | M15332 |
| EAJMKLAK_22 | 101179 | 102393 | mef(A) | Erythromycin, Azithromycin | 95.14 | 99.75 | AF227520 |
| EAJMKLAK_22 | 99604 | 101053 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 91.88 | 98.91 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EAJMKLAK_38 | 34623 | 36545 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| EAJMKLAK_22 | 97119 | 97850 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.18 | 100.00 | WP_063844791.1 |
| EAJMKLAK_22 | 101170 | 102393 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 99.02 | 100.00 | WP_012102963.1 |
| EAJMKLAK_22 | 99599 | 101053 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | BLASTX | 91.96 | 99.59 | WP_000420313.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| EAJMKLAK_61 | 2228 | 2808 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EAJMKLAK_1 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_2 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_3 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_4 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_5 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_6 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_7 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_8 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_9 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_10 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_11 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_12 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_13 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_14 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_15 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_16 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_17 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_18 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_19 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_20 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_21 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_22 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_23 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_24 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_25 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_26 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_27 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_28 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_29 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_30 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_31 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_32 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_33 | 1.0 | 0.0 | 1.0 |
| EAJMKLAK_34 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_35 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_36 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_37 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_38 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_39 | 1.0 | 0.0 | 1.0 |
| EAJMKLAK_40 | 1.0 | 0.0 | 1.0 |
| EAJMKLAK_41 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_42 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_43 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_44 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_45 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_46 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_47 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_48 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_49 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_50 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_51 | 1.0 | 0.0 | 1.0 |
| EAJMKLAK_52 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_53 | 1.0 | 0.0 | 1.0 |
| EAJMKLAK_54 | 1.0 | 0.0 | 1.0 |
| EAJMKLAK_55 | 1.0 | 0.0 | 1.0 |
| EAJMKLAK_57 | 1.0 | 0.0 | 1.0 |
| EAJMKLAK_58 | 1.0 | 0.0 | 1.0 |
| EAJMKLAK_59 | 1.0 | 0.0 | 1.0 |
| EAJMKLAK_60 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_61 | 1.0 | 0.0 | 1.0 |
| EAJMKLAK_62 | 1.0 | 0.0 | 1.0 |
| EAJMKLAK_63 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_64 | 1.0 | 0.0 | 1.0 |
| EAJMKLAK_65 | 1.0 | 0.0 | 1.0 |
| EAJMKLAK_66 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_67 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_68 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_69 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_70 | 0.0 | 1.0 | 0.0 |
| EAJMKLAK_71 | 1.0 | 0.0 | 1.0 |
| EAJMKLAK_72 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EAJMKLAK_2 | 272751 | 280978 | False | Unknown | VOG4572, |
| EAJMKLAK_23 | 58229 | 68503 | False | Myoviridae | VOG4691, |
Phigaro v2.4.0 (Database: Jan. 2024 release)