Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MINMANPB_16 | 76103 | 75399 | WalR | 9.28e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| MINMANPB_12 | 54495 | 54689 | CspR | 6.33e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| MINMANPB_12 | 54495 | 54692 | CspA | 9.70e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MINMANPB_54 | 22408 | 23310 | rep38 | 903 / 903 | 99.56 | CP005943 |
| MINMANPB_91 | 2903 | 3856 | repUS64 | 954 / 954 | 97.59 | JN601038 |
| MINMANPB_63 | 6658 | 7593 | rep28 | 936 / 936 | 95.19 | CP005948 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MINMANPB_1 | 1.0 | 0.0 | 1.0 |
| MINMANPB_3 | 0.0 | 1.0 | 0.0 |
| MINMANPB_9 | 1.0 | 0.0 | 1.0 |
| MINMANPB_10 | 1.0 | 0.0 | 1.0 |
| MINMANPB_11 | 0.0 | 1.0 | 0.0 |
| MINMANPB_12 | 0.0 | 1.0 | 0.0 |
| MINMANPB_13 | 0.0 | 1.0 | 0.0 |
| MINMANPB_14 | 0.0 | 1.0 | 0.0 |
| MINMANPB_15 | 0.0 | 1.0 | 0.0 |
| MINMANPB_16 | 0.0 | 1.0 | 0.0 |
| MINMANPB_17 | 1.0 | 0.0 | 1.0 |
| MINMANPB_18 | 0.0 | 1.0 | 0.0 |
| MINMANPB_19 | 1.0 | 0.0 | 1.0 |
| MINMANPB_20 | 0.0 | 1.0 | 0.0 |
| MINMANPB_21 | 0.0 | 1.0 | 0.0 |
| MINMANPB_22 | 0.0 | 1.0 | 0.0 |
| MINMANPB_23 | 0.0 | 1.0 | 0.0 |
| MINMANPB_24 | 0.0 | 1.0 | 0.0 |
| MINMANPB_25 | 0.0 | 1.0 | 0.0 |
| MINMANPB_26 | 0.0 | 1.0 | 0.0 |
| MINMANPB_27 | 0.0 | 1.0 | 0.0 |
| MINMANPB_28 | 0.0 | 1.0 | 0.0 |
| MINMANPB_29 | 0.0 | 1.0 | 0.0 |
| MINMANPB_30 | 0.0 | 1.0 | 0.0 |
| MINMANPB_32 | 0.0 | 1.0 | 0.0 |
| MINMANPB_33 | 0.0 | 1.0 | 0.0 |
| MINMANPB_34 | 0.0 | 1.0 | 0.0 |
| MINMANPB_35 | 0.0 | 1.0 | 0.0 |
| MINMANPB_36 | 0.0 | 1.0 | 0.0 |
| MINMANPB_37 | 0.0 | 1.0 | 0.0 |
| MINMANPB_38 | 0.0 | 1.0 | 0.0 |
| MINMANPB_39 | 0.0 | 1.0 | 0.0 |
| MINMANPB_40 | 0.0 | 1.0 | 0.0 |
| MINMANPB_41 | 0.0 | 1.0 | 0.0 |
| MINMANPB_42 | 0.0 | 1.0 | 0.0 |
| MINMANPB_43 | 0.0 | 1.0 | 0.0 |
| MINMANPB_44 | 0.0 | 1.0 | 0.0 |
| MINMANPB_45 | 0.0 | 1.0 | 0.0 |
| MINMANPB_46 | 1.0 | 0.0 | 1.0 |
| MINMANPB_47 | 0.0 | 1.0 | 0.0 |
| MINMANPB_48 | 1.0 | 0.0 | 1.0 |
| MINMANPB_49 | 0.0 | 1.0 | 0.0 |
| MINMANPB_50 | 1.0 | 0.0 | 1.0 |
| MINMANPB_51 | 0.0 | 1.0 | 0.0 |
| MINMANPB_52 | 0.0 | 1.0 | 0.0 |
| MINMANPB_53 | 0.0 | 1.0 | 0.0 |
| MINMANPB_54 | 1.0 | 0.0 | 1.0 |
| MINMANPB_55 | 0.0 | 1.0 | 0.0 |
| MINMANPB_56 | 0.0 | 1.0 | 0.0 |
| MINMANPB_57 | 1.0 | 0.0 | 1.0 |
| MINMANPB_58 | 1.0 | 0.0 | 1.0 |
| MINMANPB_59 | 1.0 | 0.0 | 1.0 |
| MINMANPB_60 | 1.0 | 0.0 | 1.0 |
| MINMANPB_61 | 1.0 | 0.0 | 1.0 |
| MINMANPB_62 | 0.0 | 1.0 | 0.0 |
| MINMANPB_63 | 1.0 | 0.0 | 1.0 |
| MINMANPB_64 | 1.0 | 0.0 | 1.0 |
| MINMANPB_65 | 0.0 | 1.0 | 0.0 |
| MINMANPB_66 | 0.0 | 1.0 | 0.0 |
| MINMANPB_67 | 1.0 | 0.0 | 1.0 |
| MINMANPB_68 | 1.0 | 0.0 | 1.0 |
| MINMANPB_69 | 1.0 | 0.0 | 1.0 |
| MINMANPB_71 | 0.0 | 1.0 | 0.0 |
| MINMANPB_72 | 1.0 | 0.0 | 1.0 |
| MINMANPB_73 | 1.0 | 0.0 | 1.0 |
| MINMANPB_74 | 0.0 | 1.0 | 0.0 |
| MINMANPB_75 | 1.0 | 0.0 | 1.0 |
| MINMANPB_76 | 0.0 | 1.0 | 0.0 |
| MINMANPB_77 | 1.0 | 0.0 | 1.0 |
| MINMANPB_78 | 1.0 | 0.0 | 1.0 |
| MINMANPB_79 | 0.0 | 1.0 | 0.0 |
| MINMANPB_81 | 1.0 | 0.0 | 1.0 |
| MINMANPB_82 | 1.0 | 0.0 | 1.0 |
| MINMANPB_83 | 0.0 | 1.0 | 0.0 |
| MINMANPB_84 | 1.0 | 0.0 | 1.0 |
| MINMANPB_89 | 0.0 | 1.0 | 0.0 |
| MINMANPB_91 | 1.0 | 0.0 | 1.0 |
| MINMANPB_93 | 0.0 | 1.0 | 0.0 |
| MINMANPB_94 | 1.0 | 0.0 | 1.0 |
| MINMANPB_99 | 1.0 | 0.0 | 1.0 |
| MINMANPB_100 | 1.0 | 0.0 | 1.0 |
| MINMANPB_102 | 1.0 | 0.0 | 1.0 |
| MINMANPB_104 | 1.0 | 0.0 | 1.0 |
| MINMANPB_106 | 1.0 | 0.0 | 1.0 |
| MINMANPB_107 | 1.0 | 0.0 | 1.0 |
| MINMANPB_112 | 1.0 | 0.0 | 1.0 |
| MINMANPB_115 | 1.0 | 0.0 | 1.0 |
| MINMANPB_117 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MINMANPB_3 | 16420 | 44429 | False | Siphoviridae | VOG8870, VOG10972, VOG4599, VOG4605, VOG6163, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198, VOG0044, VOG4693, VOG0189, VOG8647, VOG0514 |
| MINMANPB_13 | 95793 | 146990 | False | Siphoviridae | VOG0249, VOG0054, VOG1637, VOG8294, VOG7896, VOG3390, VOG4660, VOG3463, VOG3462, VOG0801, VOG4545, VOG1323, VOG0725, VOG0799, VOG5660, VOG0723, VOG4713, VOG1887, VOG3434, VOG4564, VOG0720, VOG10227, VOG0796, VOG1183, VOG6468, VOG0198, VOG0044, VOG4010, VOG11003, VOG5039, VOG4693, VOG0189, VOG5046, VOG0186, VOG1309, VOG7298, VOG0181, VOG9655, VOG6495, VOG11003, VOG1638, VOG8615, VOG6139, VOG3556, VOG6495, VOG4602, VOG6317, VOG0275, VOG0198, VOG0204, VOG4568, VOG4556, VOG2935, VOG1886, VOG4581 |
Phigaro v2.4.0 (Database: Jan. 2024 release)