Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DNCPIEKG_84 | 1034 | 2959 | tet(W) | ARO:3000194 | tet(W) | 97.18 | 100.31 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DNCPIEKG_84 | 1034 | 2946 | tet(W) | Doxycycline, Tetracycline, Minocycline | 99.01 | 99.64 | FN396364 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DNCPIEKG_84 | 1034 | 2947 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | BLASTX | 99.69 | 99.84 | WP_000691721.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DNCPIEKG_7 | 25937 | 25743 | CspA | 2.85e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DNCPIEKG_1 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_2 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_3 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_4 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_5 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_6 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_7 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_8 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_9 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_10 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_11 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_12 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_13 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_14 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_15 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_16 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_17 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_18 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_19 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_20 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_21 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_22 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_23 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_24 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_25 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_26 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_27 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_28 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_29 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_30 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_31 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_32 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_33 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_34 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_35 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_36 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_37 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_38 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_39 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_40 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_41 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_42 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_43 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_44 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_45 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_46 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_47 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_48 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_49 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_50 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_51 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_52 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_53 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_54 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_55 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_56 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_57 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_58 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_59 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_60 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_61 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_62 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_63 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_64 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_65 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_66 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_67 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_68 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_69 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_70 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_71 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_72 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_73 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_74 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_75 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_76 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_77 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_78 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_79 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_80 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_81 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_82 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_83 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_84 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_85 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_86 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_87 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_88 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_89 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_90 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_91 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_92 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_93 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_94 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_95 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_96 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_97 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_98 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_99 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_100 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_101 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_102 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_103 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_104 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_105 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_106 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_107 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_108 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_110 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_111 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_112 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_113 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_115 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_116 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_117 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_118 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_119 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_120 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_121 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_122 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_123 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_124 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_125 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_126 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_127 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_128 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_129 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_130 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_131 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_132 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_133 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_134 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_135 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_136 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_138 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_139 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_140 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_141 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_142 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_143 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_144 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_147 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_149 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_151 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_153 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_154 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_155 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_156 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_157 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_160 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_161 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_162 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_163 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_164 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_165 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_166 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_167 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_168 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_169 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_170 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_172 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_173 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_174 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_175 | 0.0 | 1.0 | 0.0 |
| DNCPIEKG_176 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_177 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_178 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_179 | 1.0 | 0.0 | 1.0 |
| DNCPIEKG_180 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)