Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ADJMGGDC_45 | 3628 | 7191 | Bifidobacterium adolescentis rpoB mutants conferring resistance to rifampicin | ARO:3004480 | Bado_rpoB_RIF | 92.48 | 100.08 | NC_008618.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ADJMGGDC_1 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_2 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_3 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_4 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_5 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_6 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_7 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_8 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_9 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_10 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_11 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_12 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_13 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_14 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_15 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_16 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_17 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_18 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_19 | 1.0 | 0.0 | 1.0 |
| ADJMGGDC_21 | 1.0 | 0.0 | 1.0 |
| ADJMGGDC_22 | 1.0 | 0.0 | 1.0 |
| ADJMGGDC_23 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_24 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_25 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_26 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_27 | 1.0 | 0.0 | 1.0 |
| ADJMGGDC_28 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_29 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_30 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_31 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_32 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_33 | 1.0 | 0.0 | 1.0 |
| ADJMGGDC_34 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_35 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_36 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_37 | 1.0 | 0.0 | 1.0 |
| ADJMGGDC_38 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_39 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_40 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_41 | 1.0 | 0.0 | 1.0 |
| ADJMGGDC_42 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_43 | 1.0 | 0.0 | 1.0 |
| ADJMGGDC_44 | 1.0 | 0.0 | 1.0 |
| ADJMGGDC_45 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_47 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_48 | 0.0 | 1.0 | 0.0 |
| ADJMGGDC_49 | 1.0 | 0.0 | 1.0 |
| ADJMGGDC_50 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ADJMGGDC_8 | 148581 | 171018 | False | Siphoviridae | VOG2038, VOG1154, VOG4544, VOG0720, VOG4576, VOG4555, VOG4553, VOG0880, VOG1581, VOG4621, VOG4557, VOG5793, VOG4605, VOG3416, VOG0083, VOG9657, VOG2021 |
Phigaro v2.4.0 (Database: Jan. 2024 release)