Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BJILDHKM_42 | 165506 | 169069 | Bifidobacterium adolescentis rpoB mutants conferring resistance to rifampicin | ARO:3004480 | Bado_rpoB_RIF | 92.82 | 100.08 | NC_008618.1 |
| BJILDHKM_33 | 81439 | 82293 | ErmX | ARO:3000596 | ErmX | 90.14 | 100.00 | M36726.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BJILDHKM_33 | 81439 | 82201 | erm(X) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.74 | 100.00 | U21300 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BJILDHKM_33 | 81439 | 82290 | erm(X) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X) | BLASTX | 99.65 | 100.00 | WP_011117480.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BJILDHKM_2 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_3 | 1.0 | 0.0 | 1.0 |
| BJILDHKM_4 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_5 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_6 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_7 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_8 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_9 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_10 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_11 | 1.0 | 0.0 | 1.0 |
| BJILDHKM_13 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_14 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_15 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_16 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_17 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_18 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_19 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_20 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_21 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_22 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_23 | 1.0 | 0.0 | 1.0 |
| BJILDHKM_24 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_25 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_26 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_27 | 1.0 | 0.0 | 1.0 |
| BJILDHKM_28 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_29 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_30 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_31 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_32 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_33 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_34 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_35 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_36 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_37 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_38 | 1.0 | 0.0 | 1.0 |
| BJILDHKM_39 | 1.0 | 0.0 | 1.0 |
| BJILDHKM_40 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_41 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_42 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_43 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_44 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_45 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_46 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_47 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_48 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_50 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_51 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_52 | 1.0 | 0.0 | 1.0 |
| BJILDHKM_53 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_54 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_55 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_56 | 1.0 | 0.0 | 1.0 |
| BJILDHKM_57 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_58 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_59 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_60 | 1.0 | 0.0 | 1.0 |
| BJILDHKM_61 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_62 | 1.0 | 0.0 | 1.0 |
| BJILDHKM_63 | 1.0 | 0.0 | 1.0 |
| BJILDHKM_64 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_65 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_66 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_67 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_68 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_69 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_70 | 0.0 | 1.0 | 0.0 |
| BJILDHKM_71 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BJILDHKM_34 | 37787 | 60665 | False | Siphoviridae | VOG5101, VOG0720, VOG2894, VOG4555, VOG4572, VOG1210, VOG5601, VOG6163, VOG3653, VOG9722, VOG3416, VOG4598, VOG4728, VOG10851, VOG0731 |
Phigaro v2.4.0 (Database: Jan. 2024 release)