Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CBBPDKFA_81 | 1 | 1215 | tet(40) | ARO:3000567 | tet(40) | 99.26 | 99.51 | AM419751.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CBBPDKFA_81 | 1 | 1215 | tet(40) | Doxycycline, Tetracycline | 99.84 | 99.51 | FJ158002 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CBBPDKFA_81 | 1 | 1212 | tet(40) | tetracycline efflux MFS transporter Tet(40) | BLASTX | 99.50 | 99.51 | WP_015573055.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CBBPDKFA_1 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_2 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_3 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_4 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_5 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_6 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_7 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_8 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_9 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_10 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_11 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_12 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_13 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_14 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_15 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_16 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_17 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_18 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_19 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_20 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_21 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_22 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_23 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_24 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_25 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_26 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_27 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_28 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_29 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_30 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_31 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_32 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_33 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_34 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_35 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_36 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_37 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_38 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_39 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_40 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_41 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_42 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_43 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_44 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_45 | 1.0 | 0.0 | 1.0 |
| CBBPDKFA_46 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_47 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_48 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_49 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_50 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_51 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_52 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_53 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_54 | 1.0 | 0.0 | 1.0 |
| CBBPDKFA_55 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_56 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_57 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_58 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_59 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_60 | 1.0 | 0.0 | 1.0 |
| CBBPDKFA_62 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_63 | 1.0 | 0.0 | 1.0 |
| CBBPDKFA_64 | 1.0 | 0.0 | 1.0 |
| CBBPDKFA_65 | 1.0 | 0.0 | 1.0 |
| CBBPDKFA_66 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_67 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_68 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_69 | 1.0 | 0.0 | 1.0 |
| CBBPDKFA_71 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_72 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_73 | 1.0 | 0.0 | 1.0 |
| CBBPDKFA_74 | 1.0 | 0.0 | 1.0 |
| CBBPDKFA_75 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_76 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_77 | 1.0 | 0.0 | 1.0 |
| CBBPDKFA_78 | 1.0 | 0.0 | 1.0 |
| CBBPDKFA_79 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_80 | 1.0 | 0.0 | 1.0 |
| CBBPDKFA_81 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_82 | 1.0 | 0.0 | 1.0 |
| CBBPDKFA_83 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_84 | 1.0 | 0.0 | 1.0 |
| CBBPDKFA_85 | 0.0 | 1.0 | 0.0 |
| CBBPDKFA_87 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)