Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CIMOIFMK_5 | 53791 | 54996 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CIMOIFMK_5 | 53257 | 53766 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
| CIMOIFMK_5 | 53794 | 54996 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CIMOIFMK_77 | 6510 | 4930 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CIMOIFMK_1 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_2 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_3 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_4 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_5 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_6 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_7 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_8 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_9 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_10 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_11 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_12 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_13 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_14 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_15 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_16 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_17 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_18 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_19 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_20 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_21 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_22 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_23 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_24 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_25 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_26 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_27 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_28 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_29 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_30 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_31 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_32 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_33 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_34 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_35 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_36 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_37 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_38 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_39 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_40 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_41 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_42 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_43 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_44 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_45 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_46 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_47 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_48 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_49 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_50 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_51 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_52 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_53 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_54 | 1.0 | 0.0 | 1.0 |
| CIMOIFMK_55 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_56 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_57 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_58 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_59 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_60 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_61 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_62 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_63 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_64 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_65 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_66 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_67 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_68 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_69 | 1.0 | 0.0 | 1.0 |
| CIMOIFMK_70 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_71 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_72 | 1.0 | 0.0 | 1.0 |
| CIMOIFMK_73 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_74 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_75 | 1.0 | 0.0 | 1.0 |
| CIMOIFMK_76 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_77 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_78 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_79 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_80 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_81 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_82 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_83 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_84 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_85 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_86 | 1.0 | 0.0 | 1.0 |
| CIMOIFMK_87 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_88 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_89 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_90 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_91 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_92 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_93 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_94 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_95 | 1.0 | 0.0 | 1.0 |
| CIMOIFMK_96 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_97 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_98 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_99 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_100 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_101 | 1.0 | 0.0 | 1.0 |
| CIMOIFMK_102 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_103 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_104 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_105 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_106 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_107 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_108 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_109 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_110 | 1.0 | 0.0 | 1.0 |
| CIMOIFMK_111 | 1.0 | 0.0 | 1.0 |
| CIMOIFMK_112 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_113 | 1.0 | 0.0 | 1.0 |
| CIMOIFMK_114 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_115 | 0.0 | 1.0 | 0.0 |
| CIMOIFMK_116 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CIMOIFMK_24 | 40514 | 50265 | True | Unknown | VOG8253, |
| CIMOIFMK_54 | 4546 | 30065 | False | Siphoviridae | VOG1893, |
Phigaro v2.4.0 (Database: Jan. 2024 release)