Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BODOENPF_6 | 36509 | 38434 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BODOENPF_6 | 36509 | 38434 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BODOENPF_6 | 36509 | 38431 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BODOENPF_1 | 0.0 | 1.0 | 0.0 |
| BODOENPF_2 | 0.0 | 1.0 | 0.0 |
| BODOENPF_3 | 0.0 | 1.0 | 0.0 |
| BODOENPF_4 | 0.0 | 1.0 | 0.0 |
| BODOENPF_5 | 0.0 | 1.0 | 0.0 |
| BODOENPF_6 | 0.0 | 1.0 | 0.0 |
| BODOENPF_7 | 0.0 | 1.0 | 0.0 |
| BODOENPF_8 | 0.0 | 1.0 | 0.0 |
| BODOENPF_9 | 0.0 | 1.0 | 0.0 |
| BODOENPF_10 | 0.0 | 1.0 | 0.0 |
| BODOENPF_11 | 0.0 | 1.0 | 0.0 |
| BODOENPF_12 | 0.0 | 1.0 | 0.0 |
| BODOENPF_13 | 0.0 | 1.0 | 0.0 |
| BODOENPF_14 | 0.0 | 1.0 | 0.0 |
| BODOENPF_15 | 0.0 | 1.0 | 0.0 |
| BODOENPF_16 | 0.0 | 1.0 | 0.0 |
| BODOENPF_17 | 0.0 | 1.0 | 0.0 |
| BODOENPF_18 | 0.0 | 1.0 | 0.0 |
| BODOENPF_19 | 0.0 | 1.0 | 0.0 |
| BODOENPF_20 | 0.0 | 1.0 | 0.0 |
| BODOENPF_21 | 0.0 | 1.0 | 0.0 |
| BODOENPF_22 | 0.0 | 1.0 | 0.0 |
| BODOENPF_23 | 0.0 | 1.0 | 0.0 |
| BODOENPF_24 | 0.0 | 1.0 | 0.0 |
| BODOENPF_25 | 0.0 | 1.0 | 0.0 |
| BODOENPF_26 | 0.0 | 1.0 | 0.0 |
| BODOENPF_27 | 0.0 | 1.0 | 0.0 |
| BODOENPF_28 | 0.0 | 1.0 | 0.0 |
| BODOENPF_29 | 0.0 | 1.0 | 0.0 |
| BODOENPF_30 | 0.0 | 1.0 | 0.0 |
| BODOENPF_31 | 0.0 | 1.0 | 0.0 |
| BODOENPF_32 | 0.0 | 1.0 | 0.0 |
| BODOENPF_33 | 0.0 | 1.0 | 0.0 |
| BODOENPF_34 | 0.0 | 1.0 | 0.0 |
| BODOENPF_35 | 0.0 | 1.0 | 0.0 |
| BODOENPF_36 | 0.0 | 1.0 | 0.0 |
| BODOENPF_37 | 0.0 | 1.0 | 0.0 |
| BODOENPF_38 | 0.0 | 1.0 | 0.0 |
| BODOENPF_39 | 0.0 | 1.0 | 0.0 |
| BODOENPF_40 | 0.0 | 1.0 | 0.0 |
| BODOENPF_41 | 0.0 | 1.0 | 0.0 |
| BODOENPF_42 | 0.0 | 1.0 | 0.0 |
| BODOENPF_43 | 0.0 | 1.0 | 0.0 |
| BODOENPF_44 | 0.0 | 1.0 | 0.0 |
| BODOENPF_45 | 0.0 | 1.0 | 0.0 |
| BODOENPF_46 | 0.0 | 1.0 | 0.0 |
| BODOENPF_47 | 0.0 | 1.0 | 0.0 |
| BODOENPF_48 | 0.0 | 1.0 | 0.0 |
| BODOENPF_49 | 0.0 | 1.0 | 0.0 |
| BODOENPF_50 | 0.0 | 1.0 | 0.0 |
| BODOENPF_51 | 0.0 | 1.0 | 0.0 |
| BODOENPF_52 | 0.0 | 1.0 | 0.0 |
| BODOENPF_53 | 0.0 | 1.0 | 0.0 |
| BODOENPF_54 | 0.0 | 1.0 | 0.0 |
| BODOENPF_55 | 0.0 | 1.0 | 0.0 |
| BODOENPF_56 | 0.0 | 1.0 | 0.0 |
| BODOENPF_57 | 0.0 | 1.0 | 0.0 |
| BODOENPF_58 | 0.0 | 1.0 | 0.0 |
| BODOENPF_59 | 0.0 | 1.0 | 0.0 |
| BODOENPF_60 | 0.0 | 1.0 | 0.0 |
| BODOENPF_61 | 0.0 | 1.0 | 0.0 |
| BODOENPF_62 | 0.0 | 1.0 | 0.0 |
| BODOENPF_63 | 1.0 | 0.0 | 1.0 |
| BODOENPF_64 | 1.0 | 0.0 | 1.0 |
| BODOENPF_65 | 0.0 | 1.0 | 0.0 |
| BODOENPF_66 | 0.0 | 1.0 | 0.0 |
| BODOENPF_67 | 0.0 | 1.0 | 0.0 |
| BODOENPF_68 | 1.0 | 0.0 | 1.0 |
| BODOENPF_69 | 0.0 | 1.0 | 0.0 |
| BODOENPF_70 | 0.0 | 1.0 | 0.0 |
| BODOENPF_71 | 0.0 | 1.0 | 0.0 |
| BODOENPF_72 | 0.0 | 1.0 | 0.0 |
| BODOENPF_73 | 0.0 | 1.0 | 0.0 |
| BODOENPF_74 | 0.0 | 1.0 | 0.0 |
| BODOENPF_75 | 1.0 | 0.0 | 1.0 |
| BODOENPF_76 | 1.0 | 0.0 | 1.0 |
| BODOENPF_77 | 0.0 | 1.0 | 0.0 |
| BODOENPF_78 | 1.0 | 0.0 | 1.0 |
| BODOENPF_79 | 0.0 | 1.0 | 0.0 |
| BODOENPF_80 | 1.0 | 0.0 | 1.0 |
| BODOENPF_81 | 0.0 | 1.0 | 0.0 |
| BODOENPF_82 | 0.0 | 1.0 | 0.0 |
| BODOENPF_83 | 0.0 | 1.0 | 0.0 |
| BODOENPF_84 | 0.0 | 1.0 | 0.0 |
| BODOENPF_85 | 0.0 | 1.0 | 0.0 |
| BODOENPF_86 | 0.0 | 1.0 | 0.0 |
| BODOENPF_87 | 0.0 | 1.0 | 0.0 |
| BODOENPF_91 | 1.0 | 0.0 | 1.0 |
| BODOENPF_92 | 1.0 | 0.0 | 1.0 |
| BODOENPF_93 | 1.0 | 0.0 | 1.0 |
| BODOENPF_94 | 1.0 | 0.0 | 1.0 |
| BODOENPF_96 | 1.0 | 0.0 | 1.0 |
| BODOENPF_97 | 1.0 | 0.0 | 1.0 |
| BODOENPF_98 | 0.0 | 1.0 | 0.0 |
| BODOENPF_99 | 1.0 | 0.0 | 1.0 |
| BODOENPF_100 | 1.0 | 0.0 | 1.0 |
| BODOENPF_101 | 0.0 | 1.0 | 0.0 |
| BODOENPF_102 | 1.0 | 0.0 | 1.0 |
| BODOENPF_103 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BODOENPF_5 | 9624 | 17821 | False | Unknown | VOG0226, |
| BODOENPF_14 | 71763 | 81788 | False | Siphoviridae | VOG7238, |
Phigaro v2.4.0 (Database: Jan. 2024 release)