Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BJIOEPGO_65 | 44 | 1963 | tet(W) | ARO:3000194 | tet(W) | 99.69 | 100.00 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BJIOEPGO_65 | 44 | 1963 | tet(W) | Doxycycline, Tetracycline, Minocycline | 99.74 | 100.00 | AJ427422 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BJIOEPGO_65 | 47 | 1963 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | BLASTX | 99.69 | 100.00 | WP_002586627.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BJIOEPGO_1 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_2 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_3 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_4 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_5 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_6 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_7 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_8 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_9 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_10 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_11 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_12 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_13 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_14 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_15 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_16 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_17 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_18 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_19 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_20 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_21 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_22 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_23 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_24 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_25 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_26 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_27 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_28 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_29 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_30 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_31 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_32 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_33 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_34 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_35 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_36 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_37 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_38 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_39 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_40 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_41 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_42 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_43 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_44 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_45 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_46 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_47 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_48 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_49 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_50 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_51 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_52 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_53 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_54 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_55 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_56 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_57 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_58 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_59 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_60 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_61 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_62 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_63 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_64 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_65 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_66 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_67 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_68 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_69 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_70 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_71 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_72 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_73 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_74 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_75 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_76 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_77 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_78 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_79 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_80 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_81 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_82 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_83 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_84 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_85 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_86 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_87 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_88 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_89 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_90 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_91 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_92 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_93 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_94 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_96 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_97 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_98 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_99 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_100 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_101 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_102 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_103 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_105 | 0.0 | 1.0 | 0.0 |
| BJIOEPGO_106 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_107 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_108 | 1.0 | 0.0 | 1.0 |
| BJIOEPGO_109 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BJIOEPGO_2 | 84955 | 100786 | False | Myoviridae | VOG4609, |
| BJIOEPGO_4 | 126034 | 130292 | True | Unknown | VOG0944, |
| BJIOEPGO_21 | 5808 | 35089 | False | Siphoviridae | VOG4545, |
| BJIOEPGO_29 | 13188 | 26239 | False | Siphoviridae | VOG0519, |
Phigaro v2.4.0 (Database: Jan. 2024 release)